Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01199 ATGGAGAAGAGGATTCAAAATGCAAGTGTAACAGTAGATGCAAGCTTGGGACATTGCTTTGTAAATGGTTTGGAGCACCGAGATGCAACTGCAATTTTCAATTGCTTACGTGCATATGCTGCTATAGATAACACTAAGAGTGCAGAAGAAATTTTTCGAGTTACTGTTGTGGCTCCATTGATACAGAAGATTATCCCACATGGATCATCAGCTGTGGTTGCTGGATCATTTGGGGATGGTCTAGAAAATGATTATCAACTAATTAAGGAGTTCATTGATAAAGACTGTAAATTTTTATTGGAAATTTCTTCAGCTGAAAATTCAGGTTTGCATGTCTTTGACTTCTTAGCCAATTCAATCCTTAAGGAGGTTCTCTCTGCAATTCAGAAGGGAAAGCCAGGTGCATTTTCTCCCGGAAGGCCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGATTTCTTGGCTTTTCTAGAAGGCTACTGTCCATCCAGATCTGCTGTTGCTAAATTTCGATCTGAAGCAATTTATACAGAATTCATGAAGCAATGGAACATTGGAGTATATTTCTCTTTGAGGTTTCAGGAAATAGCAGGGTCACTAGATTCTGTGCTTACAACATCCAGTCTTGTCCCTGTTCAAAATTCAGATGCTGGCGAAGCAAATTATCAAGGTTTAACATTAAAGCAAAGTGTTACTTTGTTGGAGAGTTTGAGATCATGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGACAGATTCCTTCGGCTATCCTTGCAGCTTCTTTCTAGATACTCAAGTTGGCTGTCTTCTGGACTGACTGCTCGCAAAAACCATAACACAAGCACTAGCCCTGGGTGTGAATGGGCCGTTTCAGCTGTCATAGATGACTTTATTTTTGTTATTCATGATATAAGATATTTGGAGGAGCAGGTTCATGGTGATTACCTTCAACATGTGCTTCAGCTTTTGTCTTCATGCTCCCCTGATGTTCTGGAATCAATAAGGCAGAGCATTTTACTGAGTGGTCAATCATTAAAATCTGTAGAACCGTTAGTCATTAAAGCAGTGGTGGAGTCACTAGTTGAAAAGTCAGTTGAGGACTTAAGACAAATGAAGGGGATAACAGCAACCTATAGGATGACTAATAAACCTCTACCTGTGAGGCATTCACCATATATTTCAGGGGTATTACGTCCCCTTAAGGCTTTTTTGGGTGGGGAGAGAGCTACAAGATATTTGGTCAGTGAAACTAGGAATGAAATACTCCTCTGTGCTGCAACTGAGATTACTGACCGTTATTATGAATTAGCTGCTGACCTTGTTAGCGTGGCAAGAAAGACAGAGTCTTCACTCCAGAAAATTAGGCAGAGTGCACAAAGACGAGCTGGAGCCAGTTCAGATATCTTAGATAATAATGTGTCTGATACTGATAAAATCTGTATGCAGTTGTTTCTTGATATTCAGGAGTATGCCCGGAACCTCTCTGCACTGGGGGTTGAAGCAGCCAATATTGCATCCTACCGTTCATTATGGCAATGTGTGGCTCCTGCAGATAGGCAAAACACAATTAATCTCTAA 1584 0.4034 MEKRIQNASVTVDASLGHCFVNGLEHRDATAIFNCLRAYAAIDNTKSAEEIFRVTVVAPLIQKIIPHGSSAVVAGSFGDGLENDYQLIKEFIDKDCKFLLEISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTEFLKNYKSSLDFLAFLEGYCPSRSAVAKFRSEAIYTEFMKQWNIGVYFSLRFQEIAGSLDSVLTTSSLVPVQNSDAGEANYQGLTLKQSVTLLESLRSCWREDVLVLSCSDRFLRLSLQLLSRYSSWLSSGLTARKNHNTSTSPGCEWAVSAVIDDFIFVIHDIRYLEEQVHGDYLQHVLQLLSSCSPDVLESIRQSILLSGQSLKSVEPLVIKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVRHSPYISGVLRPLKAFLGGERATRYLVSETRNEILLCAATEITDRYYELAADLVSVARKTESSLQKIRQSAQRRAGASSDILDNNVSDTDKICMQLFLDIQEYARNLSALGVEAANIASYRSLWQCVAPADRQNTINL 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01199 527 Pfam COG complex component, COG2, C-terminal 361 489 IPR024603 -
Gma17g01199 527 PANTHER BNAA01G14200D PROTEIN 1 526 - -
Gma17g01199 527 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 1 526 IPR009316 GO:0007030|GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01199 Gma-Chr17 10540534 10546328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01199 K20289 - gmx:100817096 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01199 17 10540534 10546328 Gma17g01199 17 10540534 10546328 ECH
Gma17g01199 17 10540534 10546328 Gma05g00444 05 4215022 4221259 GST