Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00444 ATGGCGGATCCGATCCCGGCGCCACCAAGATCCGCCACTGAACTCTTCTCGGATCCGCTGGACGCCCACCCGCTGTGGTTCAAACCGGCGTCGTTTCTCTCCCCCGACTTCGACTCCGAATCCTACATTTCGGAGCTCCGAACCTTCGTCCCCTTCGACACGCTCCGCTCCGAGCTTAACAGCTACCTCTCCTCCCTCAACCACGAGCTCATCGACCTCATCAACCGCGACTACGCCGATTTCGTCAACCTCAGCACCAAGCTCGTCGACGTCGACGCTGTCGTCGTGAGAATGCGGGCCCCGCTCGTCGAGCTCCGCGACAAGATCGAGCAGTTCAGAGGATCCGTCGAGGTCTCTCTTGTCGCCATCAAGAGCCGCTTGCGGCAGAGATCTGAGGTGGCCTCCGCTAGAGAGACTTTGGAGCTTCTTCTCGATGCGTTTCACGTCGTTTCTAAGGTTGAGAAGCTAATAAAAGAGCTGCCTAGTGTACCCACCGATTGGTCAAATGGAGATGTAAATTTGTCAGAGAGGAATAACTTTAGCAATGGAGTTTCTGTGCAGCATGTTGAGAATGAGATGAGTATCAGAGAGACTCAAAGCATGCTGCTGGAAAGAATTGCCAGTGAGATGAACCGACTAAAGTACTACGTTACACATGCAAAGAACCTTCCTTTTATTGAGAATATGGAGGAGAGGATTCAAAATGCAAGCCTAACAGTATATGCAAGCTTGGGACATTGCTTTGTAAATGGTTTGGAGAACCGAGATGCAACTGCAATTTTCAATTGCTTACGTGCATATGCTGCTATAGATAACACCAAGAATGCAGAAGAAATTTTTCGAGCTACTGTTGTGGCTCCATTGGTACAGAGGATTATCCCACATGGATCATCAGCTGTGGTTGCTGGATCATCTGGGGATGGTCTTGAAAATGATTATCAATTAATTAAGGAGTGCATTGATAAAGACTGTAAATTTTTATTGGAAATTTCTTCAGCTGAAAATTCAGGTTTGCATGTCTTTGACTTCTTAGCCAATTCAATCCTTAAAGAGGTTCTCTCTGCAATTCAGAAGGGAAAGCCAGGTGCATTTTCTCCTGGAAGACCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGATTTCTTGGCTTATCTAGAAGGTAGCTACTGTCCATCCAGATTATCTGTTGCTAAATTTCGATCTGAAGCAATTTATACTGAATTCATGAAGAGATGGAATATTGGAGTATATTTCTCTTTGAGGTTTCAGGAAATAGCAGGGTCTCTAGATTCTGTGCTTACAACATCCAGTCTTGTCCCTGTTCTAAATTCAGATGCTGGCGAAGCAAATTATCAAGGTTTAACATTAAAGCAAAGTGTTACTCTGTTGGAGAGTTTGAGATCATGCTGGAGAGAAGATGTTCTGGTTCTTTCTTGTTCTGACAGATTCCTTCGGCTATCCTTGCAGCTTCTTTCTAGATACTCAAGTTGGCTGTCATCTGGACTGACTGCTCGCAAAAACCATAACACAAGCACTAGCCCTGGGTGTGAATGGGCTGTTTCAGCTGTCATAGATGactttatttttGTTATTCATGACATACGATATTTGGAGGAGCAGGTTCGTGGTGATTACCTTCAACATGTGCTTAAGCTTTTGTCTTCATGCTCCCCTGATGTTCTGGAACCAATAAGGCAGAGCATTTTACTGGGTGGTCAATCATTAAAATCTTTAGAGCCTTTAGTCATTAAAGCAGTGGTGGAGTCACTAGTTGAAAAGTCAGTTGAGGACTTGAGACAAATGAAGGGGATAACAGCAACCTATAGGATGACTAATAAACCTCTACCTGTGAGGCCTTCACCATATGTTTCAGGGGTATTACGTCCCCTTAAGGCTTTTTTGGATGGGGAGAGAGCTACAAGATATTTGGCCAGTGAAATTAGGAATAAAATACTCCTTTGTGCTGCAACTGAGATTACTGACCGTTATTATGAATTAGCTTCTGACCTTGTTAGCGTGGCAAGAAAGACAGAGTCTTCACTCCAGAAAATTAGGCAGAGTGCACAAAGACGAGCTGGAGCAAGTTCAGATATCTCAGATAACAATGTGTCTGATACTGATAAAATCTGTATGCAGTTGTTCCTTGATATTCAGGAGTATGCCCGTAACCTCTCTGCACTGGGGGTTGAAGCAGTCAATATTGCATCCTACCGTTCATTATGGCAATGTGTGGCTCCTGCAGATAGGCAAAACACAATTAATCTCTAA 2271 0.4417 MADPIPAPPRSATELFSDPLDAHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNSYLSSLNHELIDLINRDYADFVNLSTKLVDVDAVVVRMRAPLVELRDKIEQFRGSVEVSLVAIKSRLRQRSEVASARETLELLLDAFHVVSKVEKLIKELPSVPTDWSNGDVNLSERNNFSNGVSVQHVENEMSIRETQSMLLERIASEMNRLKYYVTHAKNLPFIENMEERIQNASLTVYASLGHCFVNGLENRDATAIFNCLRAYAAIDNTKNAEEIFRATVVAPLVQRIIPHGSSAVVAGSSGDGLENDYQLIKECIDKDCKFLLEISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTEFLKNYKSSLDFLAYLEGSYCPSRLSVAKFRSEAIYTEFMKRWNIGVYFSLRFQEIAGSLDSVLTTSSLVPVLNSDAGEANYQGLTLKQSVTLLESLRSCWREDVLVLSCSDRFLRLSLQLLSRYSSWLSSGLTARKNHNTSTSPGCEWAVSAVIDDFIFVIHDIRYLEEQVRGDYLQHVLKLLSSCSPDVLEPIRQSILLGGQSLKSLEPLVIKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVRPSPYVSGVLRPLKAFLDGERATRYLASEIRNKILLCAATEITDRYYELASDLVSVARKTESSLQKIRQSAQRRAGASSDISDNNVSDTDKICMQLFLDIQEYARNLSALGVEAVNIASYRSLWQCVAPADRQNTINL 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00444 756 Pfam COG complex component, COG2, C-terminal 590 718 IPR024603 -
Gma05g00444 756 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 7 755 IPR009316 GO:0007030|GO:0015031|GO:0016020
Gma05g00444 756 Pfam COG (conserved oligomeric Golgi) complex component, COG2 25 156 IPR024602 -
Gma05g00444 756 PANTHER BNAA01G14200D PROTEIN 7 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00444 Gma-Chr5 4215022 4221259 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00444 K20289 - gmx:100800639 1415.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00444 05 4215022 4221259 Gma05g00444 05 4215022 4221259 ECH
Gma17g01199 17 10540534 10546328 Gma05g00444 05 4215022 4221259 GST