Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01163 ATGATGCAAGACTCAATTGGGATCCCTGCTTGCTTTTCTTCTTCAGCAGAGAAGCAGCATAGCCACCACGATCATGATCATGGAGCTGTGACCCGTTCTGGTCAGAGCGTGTACATGTCTGTGTATAGAACAAAGGTTGCTGATCACTGCCGTTTGATCACCATTACATGGTGCAAAAACCTCTTGCTTCATGGGCTTTCGGTGTCAGTGGAAGGCCCAGAAGGAGAAGAACAGTACTACACCTGCAAGGTCGAGCTGAAGCCATGGTACTTTTGGAGGAAACAAGGTTCCAAGCGCTTCATAGTAGATGGCAAAGCCGTTGACATTTTCTGGGACCTTAAAGCTGCAAAATTTAACGGAGAAACAGAACCAACCTCGGAGTACTATGTGGCAGTGGTTTGTGATGAAGAGGTTGTTCTTCTTCTCGGTGATCTAAAGAAAGAGGCATACCGAAGGACGGGGTGTAGGCCAGCACTCATTGACCCCATTTTGGTTTCAAAGAAAGAACACATTTTTGGCAAGAAGAAGTTCTCCACTAGAGCCAAGTTTCACGAGAAGGGTAGGTGGCATGAGATTTCGATTGAGTGCAAGAACAAGGGAAATAATAATTATAATGTGGATTCTTTAAATGGGGTTCAGCCAGAGATGGAGATAAGGATTGATGGGCACTTGGTGATTCATGTGAAGCACTTGCAATGGAAGTTTAGAGGCAACGAATCAATTCATCTCAGCAAAATGAGAGTAGAGATTGAGATTGGGTTTGGATTGAGAAAGCAAGTGGGGCCAAACAGTGGCTTTGGGAGTTAG 807 0.4511 MMQDSIGIPACFSSSAEKQHSHHDHDHGAVTRSGQSVYMSVYRTKVADHCRLITITWCKNLLLHGLSVSVEGPEGEEQYYTCKVELKPWYFWRKQGSKRFIVDGKAVDIFWDLKAAKFNGETEPTSEYYVAVVCDEEVVLLLGDLKKEAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGRWHEISIECKNKGNNNYNVDSLNGVQPEMEIRIDGHLVIHVKHLQWKFRGNESIHLSKMRVEIEIGFGLRKQVGPNSGFGS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01163 268 Pfam Plant protein of unknown function (DUF868) 33 250 IPR008586 -
Gma17g01163 268 PANTHER OS01G0909400 PROTEIN 2 250 - -
Gma17g01163 268 PANTHER EXPRESSED PROTEIN 2 250 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01163 Gma-Chr17 10136583 10137913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01163 8 250 EF-hand Containing Proteins AT5G28150 35.802 1.12e-56 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01163 - - gmx:100802860 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01163 17 10136583 10137913 Gma17g01163 17 10136583 10137913 ECH
Gma17g01163 17 10136583 10137913 Gma05g00401 05 3773589 3774569 GST
Gma17g01163 17 10136583 10137913 Gma04g01832 04 48444015 48449583 PCT
Gma17g01163 17 10136583 10137913 Gma06g01577 06 15308893 15310230 PCT
Gma04g01832 04 48444015 48449583 Gma17g01163 17 10136583 10137913 PCT
Gma06g01577 06 15308893 15310230 Gma17g01163 17 10136583 10137913 PCT