Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00401 ATGCAAGACTCAATTGGGATTCCTGCTTGCTTTTCTTCTTCAGCAGAGAAGCAGCATAGCCATGATGATCATGGAGCTGTGACCCGTTCGGGTCAGAGCGTGTACATGTCAGTGTATAGAACAAAGGTTGCTGATCACTGCCGTTTGATCACCATCACATGGTGCAAAAACCTCTTGCTTCATGGGCTTTCGGTGTCAGTGGAAGGTCCAGAAGGAGAAGAACAGTACACCTGCAAGGTCGAGCTGAAGCCATGGTACTTTTGGAGAAAACAAGGTTCCAAGCGCTTCATAGTAGATGGCAAAGCCGTTGACATTTTCTGGGACCTTAAAGCTGCAAAATTTAACGGCGAGACAGAACCAACCTCGGAGTATTATGTGGCAGTGGTTTGTGATGAAGAGGTTGTGCTGCTTCTCGGTGATCTAAAGAAAGAGGCATACAGAAGGACGGGGTGCAGACCAGCACTCATTGACCCCATTTTGGTTTCAAAGAAAGAACACATTTTTGGGAAGAAGAAGTTCTCCACTAGAGCCAAGTTTCACGAGAAGGGTAGGTGGCATGAGATTTCAATTGAGTGCAAGAACAAGGGGAATTATAATGTGGATTCTCTAGGTGGGGTTCATCCAGAGATGGAGATAAGGATTGATGGGCACTTGGTGATTCATGTGAAGCACTTGCAATGGAAGTTTAGAGGCAACGAGTCAATTCATCTCAGCAAAATGAGAGTAGAGGTATATTGGGATGTTCATGATTGGCTTTTTAGTCCTGGTTTAAAGCATGCTTTGTTCATTTTTAAGCCAATTTTGTCATCTAGTACTACTACTACCACCACTACTTCTATGTCATATTCGTCACCTTCATTATCATCCTCATCACCTCCACTATCTAATGATCAGACAAGGAATTCTGGATCAGTGGAGGGATTTAGTGTTAGTGGGTCATCAGAGTTTTGCTTGTTTCTCTATGCTTGGAAAGTTGAATGA 981 0.4373 MQDSIGIPACFSSSAEKQHSHDDHGAVTRSGQSVYMSVYRTKVADHCRLITITWCKNLLLHGLSVSVEGPEGEEQYTCKVELKPWYFWRKQGSKRFIVDGKAVDIFWDLKAAKFNGETEPTSEYYVAVVCDEEVVLLLGDLKKEAYRRTGCRPALIDPILVSKKEHIFGKKKFSTRAKFHEKGRWHEISIECKNKGNYNVDSLGGVHPEMEIRIDGHLVIHVKHLQWKFRGNESIHLSKMRVEVYWDVHDWLFSPGLKHALFIFKPILSSSTTTTTTTSMSYSSPSLSSSSPPLSNDQTRNSGSVEGFSVSGSSEFCLFLYAWKVE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00401 326 PANTHER OS01G0909400 PROTEIN 1 326 - -
Gma05g00401 326 MobiDBLite consensus disorder prediction 279 309 - -
Gma05g00401 326 PANTHER EXPRESSED PROTEIN 1 326 IPR008586 -
Gma05g00401 326 Pfam Plant protein of unknown function (DUF868) 30 324 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00401 Gma-Chr5 3773589 3774569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00401 7 326 EF-hand Containing Proteins AT5G28150 37.072 1.22e-71 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00401 - - gmx:100779755 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00401 05 3773589 3774569 Gma05g00401 05 3773589 3774569 ECH
Gma17g01163 17 10136583 10137913 Gma05g00401 05 3773589 3774569 GST
Gma05g00401 05 3773589 3774569 Gma04g01832 04 48444015 48449583 PCT
Gma05g00401 05 3773589 3774569 Gma06g01577 06 15308893 15310230 PCT
Gma04g01832 04 48444015 48449583 Gma05g00401 05 3773589 3774569 PCT
Gma06g01577 06 15308893 15310230 Gma05g00401 05 3773589 3774569 PCT