Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01148 ATGCTACAAAACCCAAGAGTAGTGCGATATTCCGCTCAGCCATTCAATCCTCCAACTCGCATGGCAACACCATCACTTTCTCCATTCCAATTAATACCCACTTCTCCATCTTTTCCAATCCTCAAACAACAATGCAGATTCTCACGTAGAGAGCTCACCATCTTCAGCAACTCTTGCTTGCTACTACTCTTGGGTGCTCAGGCAAGAGcagaagagaatttgactttggcagaagaagatgttggtaacacaagtaacagcgatcaaccagaagagaatctgactttagcagaagaagatgttgctaacacaagtaacagtgataagccagaagagaatGTGGCTGTCACTCCCAGCTGCACTGAAAGAAAACCTACAAAACAAGTATTCTTAGACATATCTATTGATGGCGAACCTGTTGGTCGCGTTACTATAGGGCTCTATGGAGATGATGTCCCTGCAGGAGTTGATAGGTTTAGTAAGATTGCAAGTGGAGCTGCTGGTATTAGCTACAGAAGAAAGGAGTTTGTCAAAATAATGCCCAATTACGTTCAACATGGTGGCCTGAGATCGTATGGGGTGGATGCTGAACTTGCTTCGAAGACAGGTAGCAACTTGGGAACTAGTAGACTTGGTGAGGAATGGGAAAGGGAGTATGAGAGATGTCCTGGGACTAAAAATGTGGCCGGAAGTGTAGGCATTATTGTGAGAAACCCATCAAAACCGCCTCCAAAGTTGAAGCTTATTGCAAAACAAGGGAAGCTGGAGATTGATGAAGAAGAAGTAGGAAATGATCCCAATGGGACAGAATTTGTCATAGCTACGAAGGATTCGCCAGAATTGGATGCATCGACTCTGGTAATTGGAAGAGTAATAGGAGGGATGGAGGTTGTGCAGAGGATCGGTCTAGTTAAAACCGTACAAGAGAATACAGGATCTCCATATTTTAGGGTGGCAAAGCTAATAGGAGACAAGAGAGCTGTTGTAGCAGAAAGAGGATTCAACCGCCCTTATTCAAAGGTCATTGTTACAAATTGTGGTTTAATGGAGTAA 1053 0.3865 MLQNPRVVRYSAQPFNPPTRMATPSLSPFQLIPTSPSFPILKQQCRFSRRELTIFSNSCLLLLLGAQARAEENLTLAEEDVGNTSNSDQPEENLTLAEEDVANTSNSDKPEENVAVTPSCTERKPTKQVFLDISIDGEPVGRVTIGLYGDDVPAGVDRFSKIASGAAGISYRRKEFVKIMPNYVQHGGLRSYGVDAELASKTGSNLGTSRLGEEWEREYERCPGTKNVAGSVGIIVRNPSKPPPKLKLIAKQGKLEIDEEEVGNDPNGTEFVIATKDSPELDASTLVIGRVIGGMEVVQRIGLVKTVQENTGSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCGLME 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01148 350 SUPERFAMILY Cyclophilin-like 125 349 IPR029000 -
Gma17g01148 350 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 131 308 IPR002130 GO:0000413|GO:0003755
Gma17g01148 350 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 1 350 IPR044185 -
Gma17g01148 350 Gene3D - 115 350 IPR029000 -
Gma17g01148 350 MobiDBLite consensus disorder prediction 100 121 - -
Gma17g01148 350 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 130 348 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01148 Gma-Chr17 9992723 9993947 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01148 K03768 - gmx:100796313 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01148 17 9992723 9993947 Gma17g01148 17 9992723 9993947 ECH
Gma17g01148 17 9992723 9993947 Gma05g00136 05 1368227 1370309 GST