Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00136 ATGCTGCAAAACCCAAGAGTATTGCGATATTCCGCTCAGCCATTCAATCCTCCAACTCGCACGGCAGCATCATCACTTTCTCCATTCCAATTAATACCCACTTCTCCATCTTTTCCAATCCTCAAACAGCAATGCAGATTCTCACGTAGAGAGCTCACAATCTTTAGCAACTCTTGCTTGCTACTACTCTTGGGTTCTCAGGCAGTGGATGGATCCAGAGCAAGAGCAgaagaagacgttggtaacacaagtaacattgatcaactagaagagaatctggcttttgctgaagaagatgctgctaacataagcagcagtgatcaaccagaagaggatttgactttggcagaagatgatgttggtaacacaaggaacagtgatcaaccagaagagaatctgactttagcagaagatgttgctaacacaggtagtgataaaccagaagagaatGTGGCTACCACTCCCAGCTGCACTGAAAGAAAACCTACCAAACAAGCATTCTTAGACGTATCTATTGACGGCGAACCTGTTGGTCGCATTACTATAGGGCTCTATGGAGATGATGTTCCTGCAGGAGTTGACAGGTTTAGTAAGATTGCAAGCGGAGCTGCTGGCATTAGCTACAGAAGAAAGGAGTTTGTCAAAATAATGCCCAATTACGTCCAACATGGCGGCCTGAGATCCTATGGGGTGGATGTTGAACTTGCTTCGAAGACAGGTAGCAACTTGGGAGCTGGTAGACTTGTTGAGGAATGGGAGAGGGAGTATGAGAGATGTCCTGGGACTAAAAACGTGGCTGGAAGTGTAGGGATTATTGTGAGAAACCCATCAAAACCGCCTCCAAAGTTGAAGCTGATTGCAAAACAAGGGAAGCTGGAGATTGATCAAGAAGAAGTAGGAACTGATCCCAATGGGACAGAATTTGTCATAGCTACAAAGGATTCACCAGAACTGGATGCATCCACTCTGGTAATTGGAAGAGTAATAGGAGGGATGGAGGTTGTGCAGAGGATCGGTCTGGTTAAAACTGTACAAGAGAATACAGGATCTCCATACTTTAGGGTGGCAAAGCTAATAGGAGACAAGAGAGCTGTTGTAGCAGAAAGAGGATTCAACCGCCCTTATTCAAAGGTCATTGTTACAAACTGCGGTTTAATGGAGTAA 1164 0.3686 MLQNPRVLRYSAQPFNPPTRTAASSLSPFQLIPTSPSFPILKQQCRFSRRELTIFSNSCLLLLLGSQAVDGSRARAEEDVGNTSNIDQLEENLAFAEEDAANISSSDQPEEDLTLAEDDVGNTRNSDQPEENLTLAEDVANTGSDKPEENVATTPSCTERKPTKQAFLDVSIDGEPVGRITIGLYGDDVPAGVDRFSKIASGAAGISYRRKEFVKIMPNYVQHGGLRSYGVDVELASKTGSNLGAGRLVEEWEREYERCPGTKNVAGSVGIIVRNPSKPPPKLKLIAKQGKLEIDQEEVGTDPNGTEFVIATKDSPELDASTLVIGRVIGGMEVVQRIGLVKTVQENTGSPYFRVAKLIGDKRAVVAERGFNRPYSKVIVTNCGLME 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00136 387 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP26-2, CHLOROPLASTIC 1 387 IPR044185 -
Gma05g00136 387 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 167 385 IPR002130 GO:0000413|GO:0003755
Gma05g00136 387 Coils Coil 86 106 - -
Gma05g00136 387 SUPERFAMILY Cyclophilin-like 163 386 IPR029000 -
Gma05g00136 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 184 199 IPR002130 GO:0000413|GO:0003755
Gma05g00136 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 292 307 IPR002130 GO:0000413|GO:0003755
Gma05g00136 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 307 319 IPR002130 GO:0000413|GO:0003755
Gma05g00136 387 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 320 335 IPR002130 GO:0000413|GO:0003755
Gma05g00136 387 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 169 345 IPR002130 GO:0000413|GO:0003755
Gma05g00136 387 Gene3D - 154 387 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00136 Gma-Chr5 1368227 1370309 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00136 K03768 - gmx:100800469 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00136 05 1368227 1370309 Gma05g00136 05 1368227 1370309 ECH
Gma17g01148 17 9992723 9993947 Gma05g00136 05 1368227 1370309 GST