Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01139 ATGGCGAAGCCTCGCAAGCCCAAGAACAACGAAGACCCGAAGCCCGAAAACTCCGGCGCCGTAGTTCACCACCAAAAGCTATGCCTCTCCATCGACATCGACAAACGCCAAGTCCACGGGTACACTGAATTGGAGATTGCGGTGCCTGAGATTGGGATCGTAGGGTTGCACGCGGAGAATTTAGGGATTGAGAGTGTTTGTGTTGACGGCGAGCCAACGGAGTTCGAGTATTACCCGCACCATCAGCAGCAGGGGGAGGATGAGAAGAGGTTTAGCTCCGTGTGTTCTCCTAGCTCTGCTGCCGATGCTGCTGTCTCAGTGTACATGTCCGCTCTTGAGAAGGAATTGGTTCCCAATTTGCTCATTAATTGTTGCAAACCTTCCAAGGCTGAAAGTGAACAACAGCAGGAGCAACAACCCACTTCTGAGAACGGGTTTCACTCTTCGGCTGAGCCCAAGCAGAATGTGAGAACTGTTCGTATTGACTATTGGATAGAGAAGGCAGAGACAGGAATACACTTCAGAAATAATCTTCTTCATACTGATAATCAGATAAGGAGAGCAAGGTGTTGGTTCCCATGTATAGATGACAATTCACAACGATGCTGCTATGACCTGGAGTTCACAGTAGCATACAATCTTGTGGCTGTCAGTACAGGAAGCTTGCTTTATCAGGTCTTAAGCAAGGACAATCCTCCTCAGAAAACTTATGTCTATAAACTGGATGTTCCAGTTGCTGCAAGGTGGATATCTTTGGCTGTTGCCCCATTTGAAATTCTTCCTGATCACCAATTTAGCCTTATATCACATATGTGTTCTCTGCCTAATCTGTCAAAGATGCGGAATACAGTGGATTTTTTCCACAGTGCCTTCAGCTGCTATAAGGATTATCTTTCTGTAGACTTCCCATTTGACTCATATACACAAGTTTTCATAGAGCCAGAGATGGCAGTGTCTTCATTGAGTTTAGGAGCCTCTATGAGTGTATTTAGTTCTCAAGTTTTGTTTGATGAGAAGGTTATTGACCAGACTATTGATACAAGGGTAAAACTTGCATATGCTCTCGCAAGACAGTGGTTTGGTGTGTACATCACTCCTGAGGCACCAAATGATGAGTGGCTCTTGGATGGACTTGCTGGTTTCTTGACAGATTTTTTTATTAAGAAACATTTGGGAAATAATGAGGCACGGTACAGGAGATACAAGGCAAATTGTGCTGTTTGCAAAGTTGATAATGGTGGAGCGACAGCTTTGAGCTGTTCAGCTTCCTGTAAAGATTTATATGGAACTCAGTGCATTGGTTTGTATGGAAAAATAAGATCATGGAAGTCTGTGGCAGCTCTTCAGATGTTGGAAAAACAAATGGGTCCTGAATCTTTTCGTAGAATTTTGCAAACTATAGTTTCTCGTGCTCAAGATAAAACTCGTTCCATAAAGACTCTTAGTACTAAGGAGTTTCGACATTTTGCTAACAAGGTTGGGAATCTTGAACGCCCATTTCTTAAAGATTTCTTTCCTCGGTGGGTTGGTTCTTGTGGATGTCCTGTTTTAAGGATGGGGTTTTCCTATAATAAAAGGAAGAATATGGTTGAATTGGCTGTGCTGCGGGGATGTACAGCATTGCAGACTTCAAATACATCCATTCTTGATATTAATCCAGATACAGAAACTCGAGATGGAGATACTGGATGGCCTGGTATGATGAGCATCAGGGTATATGAACTTGATGGTATGTATGACCATCCAATTCTACCAATGGCTGGAGATGCATGGCAACTATTGGAAATACAATGCCACTCAAAGCTTGCTGCTAGACGCTTTCAGAAGCCCAAGAAAGGTTTAAAACTTGATGGGTCTGATGATAATGGTGATGTGCCTTCCATGGATATGCGTTCAAATACCGAGTCCCCTTTATTATGGATTAGAGCAGATCCTGATATGGAGTACCTTGCTGAGGTTCATTTTAACCAACCAGTTCAGATGTGGATCAATCAATTAGAGAAGGACAAAGATGTTATTGCTCAGGCACAAGCAATTGCAGCCCTTGAGGCATCCCCACAGCTATCATTTTCTATTGTTAATGCCCTAAATAATTTTCTCAGTGACTCCAAGGCTTTTTGGAGAGTACGGATCGAAGCGGCATTTGCATTGGCAAATTCAGCATCTGAGGAAACTGATTTTTCTGGTCTACTCCATCTGATGAAATTTTACAAGAGTCGAAGGTTTGATACTGACATTGGACTGCCAAAGCCAAACGATTTTCATGACTTTGCCGAGTATTTTGTTCTTGAGGCTATTCCACATGCTGTTGCTATGGTTAGAGCTGCTGACAAGAAAAGCCCAAGAGAGGCTATCGAGTTTGTTTTACAGCTATTGAAGTACAATGACAACAATGGGAACCCTTACTCAGATGTATTCTGGCTTGCTGCATTAGTCCAGTCAGTTGGTGAGCTTGAGTTTGGGCAACAGAGTATTCTCTTACTGTCATCACTCCTCAAACGCATTGACCGGCTTCTACAATTTGATAGTCTCATGCCAAGCTACAATGGAATCTTGACTATCAGTTGTATCCGGACATTGACCCAGATTGCATTAAAGCTTTCAGGGTTCATTCCTCTTGATCGAGTTTATGGACTTGTAAAGCCTTTTCGGGACATAAAGGCATTGTGGCAAGTTCGAATTGAAGCAAGTAGAGCACTCCTTGATCTTGAATTCCACTGCAAGGGCATGGATTCAGCTTTGCTTTTATTTATCAAATACATAGAGGAGGAGCATTCCTTAAGAGGTTGGCAGTTAAAACTAGCCACCCATGTTATGAGGCTATGTCAGATGAGAGATGGATTGAATTCAAATGACGAAATTACAAGCCAAACTCTTGTCTCTATGCTTAATTTACTGGAAGGGCGTATAGCTTTTAATAATGCCTTTCTCCGGCATTACTTGTTCTGCATATTACAAATACTTGCAAGAAGACACCCAACTCTTCATGGGATTCCCAGAGAAAATAGAATGCTGCATATGAGTCTTACAGAAGCTAGTAACTATCAAAAGAACATGCTTGCTCTTGATTCAGAAAGCAAACCTTTGGATCTGCCAAGCTCTATTGATGATCTTACACAAAATTTGGGCCCGACAATGGAGGGCTTGAGGGACGCACTTGATGAAGCTCCTAAGGACCAACCTTGTGAAGCTCCCACACAGGTGCACCTTGAAGCTCTAAAGGAAGCGTCCCTTGAGAAGCCCAAAGAGGTATTTACTGAATTTCCCCAGGAAGCACCAATTGAAGCTCCAAATGAAATTTCTAAGGAGGCTGATACTGTATCCAATAGCCATGAAAGAAAGAGACCCATTAAAATCAAGGTCAAACAATCTTCTGCCACCAGTAGGGCTGATACTGATAATCAGGTGGTTGAACGTTCTTTAGGTGGTCGTAATGAAATGGATCATGGAGCTAGCAGTTCAGTTTCTGTAGATGCACCCCAGAGGAATTTTGCTGAGACTGTTAGCATCAGTAATCACAATATTGATGAAGTTAATTCTTGGCATGATCGCGGTTCACGCATGACTGCCAGCATTGGTAGTGCAAAGTTTTTGAGTGATGGTGATGAATTGGTCAAAGAACTCCAGTGCACTGCTGATTCAAGTATAGTTTATTCACAACCTCAGCCAGAAGATCCATCATCATCCAGTATTATCCAGGATAACAATATAGATGCTGATGCACGACGATATGCCAGCCTTCAAACTCTTTCAGTTGCAAGATTTGATCCTGACGGAGAACCATTAGGTAAAGAAATTTCTGCTCGGGGGAAAGAAAAGCACAAAAGCAAGGAAAAGAAACGGAAACGGGAAAGTAATAAAGGACACCATGATGATCCAGAGTATTTGGAGCGCAAACGATTAAAGAAAGAGAAAAAACGTAGGGAAAAAGAACTGGCAAAACTTCAGAGTGATGAAGCGAAGAGATCCTCCATAGATATGTCAAGCAAGAAAGAGGAGCCTGTAGTGGACGTTGTTGCTAGACAGGTTACATCTGTTGAACCCACTGGATATGATTCTAAATTAGAAATAAAAAAGATAGATACCACCAAACCGGAGCCATCTGAAGGCACATCTGGTGCACCAAAAATTCGAATTAAAATTAAAAACCGAATGCTCAGCAAGCCCTAG 4170 0.4242 MAKPRKPKNNEDPKPENSGAVVHHQKLCLSIDIDKRQVHGYTELEIAVPEIGIVGLHAENLGIESVCVDGEPTEFEYYPHHQQQGEDEKRFSSVCSPSSAADAAVSVYMSALEKELVPNLLINCCKPSKAESEQQQEQQPTSENGFHSSAEPKQNVRTVRIDYWIEKAETGIHFRNNLLHTDNQIRRARCWFPCIDDNSQRCCYDLEFTVAYNLVAVSTGSLLYQVLSKDNPPQKTYVYKLDVPVAARWISLAVAPFEILPDHQFSLISHMCSLPNLSKMRNTVDFFHSAFSCYKDYLSVDFPFDSYTQVFIEPEMAVSSLSLGASMSVFSSQVLFDEKVIDQTIDTRVKLAYALARQWFGVYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKANCAVCKVDNGGATALSCSASCKDLYGTQCIGLYGKIRSWKSVAALQMLEKQMGPESFRRILQTIVSRAQDKTRSIKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTALQTSNTSILDINPDTETRDGDTGWPGMMSIRVYELDGMYDHPILPMAGDAWQLLEIQCHSKLAARRFQKPKKGLKLDGSDDNGDVPSMDMRSNTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSASEETDFSGLLHLMKFYKSRRFDTDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILLLSSLLKRIDRLLQFDSLMPSYNGILTISCIRTLTQIALKLSGFIPLDRVYGLVKPFRDIKALWQVRIEASRALLDLEFHCKGMDSALLLFIKYIEEEHSLRGWQLKLATHVMRLCQMRDGLNSNDEITSQTLVSMLNLLEGRIAFNNAFLRHYLFCILQILARRHPTLHGIPRENRMLHMSLTEASNYQKNMLALDSESKPLDLPSSIDDLTQNLGPTMEGLRDALDEAPKDQPCEAPTQVHLEALKEASLEKPKEVFTEFPQEAPIEAPNEISKEADTVSNSHERKRPIKIKVKQSSATSRADTDNQVVERSLGGRNEMDHGASSSVSVDAPQRNFAETVSISNHNIDEVNSWHDRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNIDADARRYASLQTLSVARFDPDGEPLGKEISARGKEKHKSKEKKRKRESNKGHHDDPEYLERKRLKKEKKRREKELAKLQSDEAKRSSIDMSSKKEEPVVDVVARQVTSVEPTGYDSKLEIKKIDTTKPEPSEGTSGAPKIRIKIKNRMLSKP 1389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01139 1389 MobiDBLite consensus disorder prediction 1285 1300 - -
Gma17g01139 1389 MobiDBLite consensus disorder prediction 1121 1139 - -
Gma17g01139 1389 MobiDBLite consensus disorder prediction 1089 1159 - -
Gma17g01139 1389 CDD M1_like_TAF2 24 509 - -
Gma17g01139 1389 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 18 255 IPR042097 -
Gma17g01139 1389 Gene3D Neutral Protease Domain 2 265 513 IPR027268 -
Gma17g01139 1389 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 18 1319 IPR037813 GO:0005669
Gma17g01139 1389 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 276 518 - -
Gma17g01139 1389 MobiDBLite consensus disorder prediction 132 151 - -
Gma17g01139 1389 Pfam Peptidase family M1 domain 285 481 IPR014782 GO:0008237|GO:0008270
Gma17g01139 1389 MobiDBLite consensus disorder prediction 1258 1272 - -
Gma17g01139 1389 Coils Coil 1296 1323 - -
Gma17g01139 1389 MobiDBLite consensus disorder prediction 1251 1335 - -
Gma17g01139 1389 Gene3D tricorn interacting facor f3 domain 21 254 IPR042097 -
Gma17g01139 1389 MobiDBLite consensus disorder prediction 1358 1389 - -
Gma17g01139 1389 MobiDBLite consensus disorder prediction 1308 1335 - -
Gma17g01139 1389 MobiDBLite consensus disorder prediction 1215 1236 - -
Gma17g01139 1389 SUPERFAMILY ARM repeat 447 994 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01139 Gma-Chr17 9905264 9919482 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01139 K03128 - gmx:100792795 2666.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01139 17 9905264 9919482 Gma17g01139 17 9905264 9919482 ECH
Gma17g01139 17 9905264 9919482 Gma05g00127 05 1291872 1310690 GST