LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma05g00127	ATGGCGAAGCCTCGCAAGCCCAAGAACAACGAAGACCCCAAGCCCGAAAACTCCGGCGCCGTAGTTCACCACCAAAAGCTATGCCTCTCCATCGACATCGACAAACGCCAAGTCCACGGGTACACTGAATTGGAGATTGCGGTACCGGAGATTGGGATCGTAGGGTTGCACGCGGAAAATTTAGGGATTGAGAGTGTTTGGGTTGACGGCGAGCCCACGGAGTTCGAGTATTACCCGCACCGTCAGCAGCAGGCCGAGGATGACAAGAGGTTTAGCTCCGTGTGTTCTCCTAGCTCTGCTGCTGATGCTGCTGTCTCAGTGTACATGTCCGCTCTCGAGAAGGAACTGGTTCCCAATTTACTCATTAATTGTTGCAAACCTTCAAAGGCTGAAAGTGAACAACAGCAGGAGCGACAACCCGCTTCTGAGAACGGGTTTCACTCCTCGGCTGAGCCCAAGCAGAATGTCAGAACTGTTCGTATTGACTATTGGATAGAGAAGGCAGAGACAGGAATACACTTCAGAAATAATCTTCTTCATACCGATAATCAGATAAGGAGAGCAAGGTGTTGGTTCCCTTGTATAGATGACAATTCGCAACGATGCTGCTACGACCTGGAGTTCACTGTAGCACATAATCTTGTGGCTGTCAGTACAGGAAGCTTGCTTTATCAGGTCTTAAGCAAGGACAATCCTCCTCGGAAAACATATTTCTATAAATTGGATGTTCCAGTTGCTGCAAGGTGGATATCTTTGGCTGTTGCCCCATTTGAAGTTTTTCCTGATCACCAATTTAGTCTTATATCTCATATGTGTTCGCCGCCTAATCTGTCAAAGATGCGGAATACAGTGGATTTTTTCCACAGTGCCTTCAGCTGCTATAAGGATTTTCTTTCTGTAGACTTCCCGTTTGACTCATATACGCAAGTTTTCATAGAGCCAGAGATGGCAGTGTCATCATTGAGTTTGGGAGCCTCTATGAGTATATTTAGTTCCCAAGTTTTGTTTGATGAGAAGGTTATTGACCAGACTATTGATACAAGGGTTAAACTTGCATATGCTCTCGCAAGACAGTGGTTTGGTGTGTATATCACTCCTGAGGCACCAAATGATGAGTGGCTCTTGGATGGACTTGCTGGTTTCTTGACAGATTTTTTTATTAAGAAACATTTGGGAAACAATGAGGCACGGTACAGGAGATACAAGGAAAATTGTGCTGTTTGCAAAGTTGATAATGATGGAGCAACAGCTTTGAGCTGTTCAGCTTCCTGTAAAGATTTATATGGAACTCAGTGCATTGGTTTGTATGGAAAAATTAGATCATGGAAGTCTGTGGCAGTTCTTCAGATGTTGGAAAAGCAAATGGGTCCTGAATCTTTTCGTAGAATTTTGCAAACTATAGTTTCTCGTGCTCAAGATAAAACACGTTCCATAAAGACTCTTAGTACTAAGGAGTTTCGACATTTTGCTAACAAGGTTGGGAATCTTGAACGCCCATTTCTTAAAGACTTCTTTCCTCGGTGGGTCAGTTCTTGTGGATGTCCTGTTTTAAGGATGGGGTTTTCCTATAACAAAAGGAAGAACATGGTTGAATTGGCCGTGTTGCGGGGATGTACAACATTGCAGACTTCAAGTACATCCATTCTTGATATTAATCCTGACACAGAAACTCGAGATGGAGATATTGGATGGCCTGGTATGATGAGCATCAGGGTATATGAACTTGATGGTATGTATGACCATCCAATTCTACCAATGGCTGGAGAAGCATGGCAACTATTGGAAATACAATGCCACTCAAAGCTTGCCGCTAGGCGCTTTCAGAAGCCCAAGAAAGGTTTAAAACTTGATGGCTCTGATGATAATGGTGATGTGCCTTCCATGGATATGCGCTTGAATACCGAGTCCCCTTTATTATGGATTAGAGCAGATCCTGATATGGAGTACCTTGCTGAGGTTCATTTTAACCAACCAGTTCAAATGTGGATCAATCAATTAGAGAAGGACAAAGATGTTATTGCTCAGGCACAAGCAATTGCAGCCCTTGAGGCATCCCCACAGCTATCATTTTCTATTGTAAATGCCCTAAACAATTTTCTCAGTGACTCAAAGGCTTTCTGGAGAGTACGGATTGAAGCGGCATTTGCATTGGCAAATTCAGCATCTGAGGAAACTGATTTTTCTGGTCTACTTCATTTGGTGAAATTTTACAAGAGTCGAAGGTTTGATCCTGACATTGGACTGCCAAAGCCAAACGATTTTCAAGACTTTGCTGAGTATTTTGTTCTTGAGGCTATTCCTCATGCTGTTGCTATGGTTAGAGCAGCTGACAAGAAAAGCCCAAGAGAAGCTATCGAGTTTGTTTTACAGCTATTGAAGTACAATGACAACAATGGGAACCCTTACTCTGATGTCTTCTGGCTTGCTGCGTTGGTCCAGTCAGTTGGCGAGCTTGAGTTTGGACAACAGAGTATTCTCTTATTGTCATCACTCCTCAAACGCATTGACCGGCTTCTACAATTTGATAGTCTCATGCCAAGCTACAATGGAATCTTGACTATCAGTTGTATCCGGACATTGACCCAGATTGCATTAAAGCTTTCGGGGTTCATTCCTCTTGTAAGTACCTTGTTATTGAGCATCAAAGTGCGGTTCAAAGGTTGGCATAAGATACTTAATGCTTCAGCTTTACTACAGGATCGAGTTTATGAACTTGTAAAGCCTTTTCGGGACTTAAAGGCATTGTGGCAAGTTCAAATTGAAGCAAGTAAAGCACTCCTTGATCTTGAATTCCACTGCAAGGGCATGGATTCAGCTTTGCTTTTATTTATCAAATACATAGAGGAGGAGCATTCCTTAAGAGGTTGGCAGTTAAAACTGGCCACCCATGTTATGAGGCTATGTCAGATGAGGGATGGATTGAATTCAAATGACGAAATTACAAGCCAAACTCTTGTCTCTATGCTTAATTTACTAGAAGGGCGTATAGCTTTTAATAATGTCTCTCTCCGGCACTACTTGTTCTGCATATTACAAATACTTGCAAGAAGACCCCCAACTCTTCATGGGATTCCCAGAGGAAACAGAATGCTGCATATGAGTCTTGCAGAAGCTTGTAACTATCAGAAGAACATATTTGCTCTTGATTCAGAAAGCAAACCCTTGGATCTGCCTAGCTCTACCAAAAATCTTACACAAAATTTGGGCCCGACAATGGAGGGCTTGAGGGATGCAGTTGATGAAGCTCCTAAGGACCAACCTTGTGAAGCTTCCACACAGGTGCACCTTGAAGCTTTAAAGGAAGCATCTCTAGAGAAGCCCAAAGAGGTATTTACTGAATTTCCCCAGGAAGCACCAATTGAAGCTCCAAATCCAAATGAAGTTTCCAAGGAAGTTGATACTGTATCGAATAGCCATGAAAGAAAGAGGCCCATTAAAATCAAGGTCAAGCAATCTTCTGCCACCAGTAGGGCTGATACTGATAATCAAGTGGTTGAATGTTCTTTAGGTGGTCGTAATGAAATGGATCATGGAGCTAGTAGTTCAGTTTCTGTAGATGCACCCCAGAGGAATTTTGCCGAGACTGTTAGCATCAGTAATCATAATATTGACGAAGTTAATTCTTGGCATGATCGTGGTTCTCGCATGACTGCCAGCATTGGCAGTGCAAAGTTTTTGAGTGATGGTGATGAATTGGTCAAAGAACTGCAGTGCACTGCTGATTCAAGTATAGTTTATTCACAACCTCAGCCAGAAGATCCATCATCATCCAGTATTATCCAGGATAACAATATAGATGCTGATGCACGACGATATGCCAGCCTTCAAACTCTTTCAGTTGCAAGATTTGATCCTGACGGAGAATCATTAGGTAAAGAAATTTCTGCTCGGGGGAAAGAAAAGCACAAAAGCAAGGAAAAGAAACGGAAACAGGAAAGTAATAAAGGACACCATGATGATGTAGAATATTTGGAGCGAAAACGACTAAAGAAAGAGAAAAAACATCGGGAAAAAGAGCTGGCAAAACTTCAGAGTGATGAAGCAAAGAGATCCTCCATTGATTTGTCAAGCAAGAAAGTGGAACCCGTAGTGGACGTTGCTAGACAGGTTAAATCTGTTGAACCCAGTGGATATAATTCTAAAGTAGAAATAAAAAAGATAGATACCAAACCGGAGCCATCTGAAGGCACATCTGGTGCACCAAAAATTCGAATTAAAATTAAAAACCGAATGCTCAGCAAGTCCTAG	4248	0.4244	MAKPRKPKNNEDPKPENSGAVVHHQKLCLSIDIDKRQVHGYTELEIAVPEIGIVGLHAENLGIESVWVDGEPTEFEYYPHRQQQAEDDKRFSSVCSPSSAADAAVSVYMSALEKELVPNLLINCCKPSKAESEQQQERQPASENGFHSSAEPKQNVRTVRIDYWIEKAETGIHFRNNLLHTDNQIRRARCWFPCIDDNSQRCCYDLEFTVAHNLVAVSTGSLLYQVLSKDNPPRKTYFYKLDVPVAARWISLAVAPFEVFPDHQFSLISHMCSPPNLSKMRNTVDFFHSAFSCYKDFLSVDFPFDSYTQVFIEPEMAVSSLSLGASMSIFSSQVLFDEKVIDQTIDTRVKLAYALARQWFGVYITPEAPNDEWLLDGLAGFLTDFFIKKHLGNNEARYRRYKENCAVCKVDNDGATALSCSASCKDLYGTQCIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSIKTLSTKEFRHFANKVGNLERPFLKDFFPRWVSSCGCPVLRMGFSYNKRKNMVELAVLRGCTTLQTSSTSILDINPDTETRDGDIGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSKLAARRFQKPKKGLKLDGSDDNGDVPSMDMRLNTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFQDFAEYFVLEAIPHAVAMVRAADKKSPREAIEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILLLSSLLKRIDRLLQFDSLMPSYNGILTISCIRTLTQIALKLSGFIPLVSTLLLSIKVRFKGWHKILNASALLQDRVYELVKPFRDLKALWQVQIEASKALLDLEFHCKGMDSALLLFIKYIEEEHSLRGWQLKLATHVMRLCQMRDGLNSNDEITSQTLVSMLNLLEGRIAFNNVSLRHYLFCILQILARRPPTLHGIPRGNRMLHMSLAEACNYQKNIFALDSESKPLDLPSSTKNLTQNLGPTMEGLRDAVDEAPKDQPCEASTQVHLEALKEASLEKPKEVFTEFPQEAPIEAPNPNEVSKEVDTVSNSHERKRPIKIKVKQSSATSRADTDNQVVECSLGGRNEMDHGASSSVSVDAPQRNFAETVSISNHNIDEVNSWHDRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNIDADARRYASLQTLSVARFDPDGESLGKEISARGKEKHKSKEKKRKQESNKGHHDDVEYLERKRLKKEKKHREKELAKLQSDEAKRSSIDLSSKKVEPVVDVARQVKSVEPSGYNSKVEIKKIDTKPEPSEGTSGAPKIRIKIKNRMLSKS	1415

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma05g00127	1415	MobiDBLite	consensus disorder prediction	1116	1163	-	-
	Gma05g00127	1415	SUPERFAMILY	Metalloproteases ("zincins"), catalytic domain	269	518	-	-
	Gma05g00127	1415	CDD	M1_like_TAF2	24	509	-	-
	Gma05g00127	1415	MobiDBLite	consensus disorder prediction	132	151	-	-
	Gma05g00127	1415	Pfam	Peptidase family M1 domain	285	481	IPR014782	GO:0008237\|GO:0008270
	Gma05g00127	1415	MobiDBLite	consensus disorder prediction	1312	1328	-	-
	Gma05g00127	1415	MobiDBLite	consensus disorder prediction	1245	1264	-	-
	Gma05g00127	1415	Coils	Coil	1326	1346	-	-
	Gma05g00127	1415	MobiDBLite	consensus disorder prediction	1284	1356	-	-
	Gma05g00127	1415	SUPERFAMILY	ARM repeat	446	1020	IPR016024	-
	Gma05g00127	1415	MobiDBLite	consensus disorder prediction	1286	1300	-	-
	Gma05g00127	1415	MobiDBLite	consensus disorder prediction	1336	1356	-	-
	Gma05g00127	1415	Gene3D	Neutral Protease Domain 2	264	513	IPR027268	-
	Gma05g00127	1415	MobiDBLite	consensus disorder prediction	1149	1163	-	-
	Gma05g00127	1415	SUPERFAMILY	Leukotriene A4 hydrolase N-terminal domain	18	255	IPR042097	-
	Gma05g00127	1415	Gene3D	tricorn interacting facor f3 domain	21	254	IPR042097	-
	Gma05g00127	1415	PANTHER	TRANSCRIPTION INITIATION FACTOR TFIID	18	1347	IPR037813	GO:0005669

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma05g00127	Gma-Chr5	1291872	1310690	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma05g00127	K03128		-	gmx:100803129	2670.19

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma05g00127	05	1291872	1310690	Gma05g00127	05	1291872	1310690	ECH
	Gma17g01139	17	9905264	9919482	Gma05g00127	05	1291872	1310690	GST