Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01133 ATGGTTAGTGGAGCTCTCAAAACGACTGAGAACAGTCTTCACAAGCAAGCTTCTCAGGTTTCCGATGCCAATGATGCAGTTGCTGACCCTGATATTCCTGCAAAGAGAGCCAGGCTGCAGAAGGAACAGAAGGATTTGACCTTTCAGGACATATATCAAAATGATGGCGTGTTTGACGACGAAGACAGTGATTGGGAGCCGTTTCAGTTACACAAGTGTATGGATTTTGAAATCAAAAAGTGGTTCTGCAGAAAGTGTACCATGGTTAACCTCGATCACGATGACTGTTGCTACATATGCGGGGAGCATACGGATTCTAAAATCCTTAGCCATGGGTTTTTTGCATCTCCTTTAGCCCAAGATGAGAATCTGACTGAAGTCCAGGGGATCGCTAAAGGACTGAAAGATGTTGGCTCACAGGAATTAGTGGCAAATAGTTCTACAGCAATCGGCTTTGATGAGAGAATGTTGTTACATGCAGAAGTTGAAAAGAAATCCACTCTGCATCCTGAGAGGCCAGATCGTCTTCAAGCAATTGCTGCTAGTCTTGCTAGAGCTGGCATATTTCCTGGAAAATGCTATTCAATTCCTGCTAGAGAAATCACACCAGAAGAACTTATTACGGTTCATTCCTTGGAGCATATTGAATCTGTGGAAGTTACAAGCGAATCACTTTCTAGTTATTTCACTTCTGACACATATGCCAATGAGCATTCAGCACTTGCTGCTAGGTTGGCAGCTGGGTTATGTGCTGATCTAGCATCAGCAATTGTTTCTGAGCGAGCCAAAAATGGATTTGCTTTGGTTAGGCCTCCTGGTCATCATGCTGGTGTAAGACATGCAATGGGGTTCTGCCTTCACAATAATGCTGCTGTGGCTGCATTGGCAGCTCAAGCTGCAGGGGCTAGGAAGGTGCTAATTTTGGATTGGGATGTTCATCACGGAAATGGGACACAAGAAATATTTGAACAAAACAAATCGGTCTTGTATATATCATTGCATAGACACGAGGGAGGAAAATTTTATCCTGGTACTGGAGCTGCTGAAGAGGTTGGTAGTATGGGTGCAGAAGGATACTGTGTGAATATTCCATGGAGTCGAGGAGGAGTTGGTGACAATGACTATATTTTTTCATTTCAGCATGTTGTCCTTCCTATAGCTGCTGAGTTTAATCCAGATTTTACCATAGTATCTGCTGGATTTGATGCTGCAAGAGGTGATCCCCTAGGATGTTGCGATATTACTCCCTCTGGCTATGCACATATGACACATATGTTGAATGCCCTTTCTGGCGGAAAATTGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGTTCTATATCATCTTCTGCAACTGCAGTAATCAAGGTATTACTGGGTGAGAGTCCTGGATGTGAACTGGAAAATAGTTTCCCTTCCAAAGCTGGCCTGCAAACTGTTTTGGAAGTCCTCAAAATTCAGATGAACTTTTGGCCTGCCCTGGGTCCCATTTTTGTGACTTTGGAGTCACAATGGAGGGTGTACTGTTTTGGAAAAAAAAGGAAACATATTAAGAAACGACACCGAATTCTGGTTCCAATGTGGAGTTGGTCAGGCGCAGTAGCCACTTGGTATAATTTGGGAGACAATGGTTCTGCCAGTTGTGGACTAAGCTTAAGTGTCCAGGGTTCTTTGTATGAGCCAGAGGATGGAGATGGAATGGAGGTGATGGCAAACATAGACATAGATATAGCAGTAGACATAAAGCCACCAATTCCTCCCTCTCTCCTCTATAAAACTCAGATATCTTGTGCTTGA 1797 0.4352 MVSGALKTTENSLHKQASQVSDANDAVADPDIPAKRARLQKEQKDLTFQDIYQNDGVFDDEDSDWEPFQLHKCMDFEIKKWFCRKCTMVNLDHDDCCYICGEHTDSKILSHGFFASPLAQDENLTEVQGIAKGLKDVGSQELVANSSTAIGFDERMLLHAEVEKKSTLHPERPDRLQAIAASLARAGIFPGKCYSIPAREITPEELITVHSLEHIESVEVTSESLSSYFTSDTYANEHSALAARLAAGLCADLASAIVSERAKNGFALVRPPGHHAGVRHAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGKFYPGTGAAEEVGSMGAEGYCVNIPWSRGGVGDNDYIFSFQHVVLPIAAEFNPDFTIVSAGFDAARGDPLGCCDITPSGYAHMTHMLNALSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCELENSFPSKAGLQTVLEVLKIQMNFWPALGPIFVTLESQWRVYCFGKKRKHIKKRHRILVPMWSWSGAVATWYNLGDNGSASCGLSLSVQGSLYEPEDGDGMEVMANIDIDIAVDIKPPIPPSLLYKTQISCA 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01133 598 SUPERFAMILY Arginase/deacetylase 145 491 IPR023696 -
Gma17g01133 598 Pfam Histone deacetylase domain 169 457 IPR023801 -
Gma17g01133 598 MobiDBLite consensus disorder prediction 1 23 - -
Gma17g01133 598 ProSitePatterns Zinc finger RanBP2-type signature. 81 100 IPR001876 -
Gma17g01133 598 PRINTS Histone deacetylase superfamily signature 271 294 IPR000286 -
Gma17g01133 598 PRINTS Histone deacetylase superfamily signature 304 319 IPR000286 -
Gma17g01133 598 PRINTS Histone deacetylase superfamily signature 392 402 IPR000286 -
Gma17g01133 598 Gene3D Histone deacetylase domain 145 496 IPR037138 -
Gma17g01133 598 PANTHER HISTONE DEACETYLASE-RELATED 22 536 - -
Gma17g01133 598 MobiDBLite consensus disorder prediction 1 27 - -
Gma17g01133 598 PANTHER HISTONE DEACETYLASE 22 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01133 Gma-Chr17 9819133 9827999 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01133 - - gmx:100802870 1036.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01133 17 9819133 9827999 Gma17g01133 17 9819133 9827999 ECH
Gma17g01133 17 9819133 9827999 Gma05g00122 05 1225928 1233283 GST