Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00122 ATGGGTAGTGGAGCTCTCGAAACGAATGAGGAAGCTGAGAACAGTCTTCATAAGCAAGCTTCTCAAGTTTCTGATGCCAATGATGCAGTTGCTGACCCTGATGTTCCTGCGAAGAGGGCCAGGCTGCAGAAGGAGCAGAAGGATTTGACGTTTCAGGATATATATCAAAATGACGGCATGTTTGACGACTATGACGACGAAGACAGTGATTGGGAGCCGTTTCAGTTACACAACAAGTGTGTGGAATTTGAAATCAAAAAGTGGTTCTGCAGAAATTGTACTATGGTTAACCTCGATCACGACGACTGTTGCTACATATGTGGGGAGCATAAGGATTCTAAAATCCTTAGCCTTGGGTTTTTTGCATCTCCTTTAGCCCAAGATGAGGATCTGACTGAAGTCCAGGGGATCGTTAAAGGACTGAAAGATGTTGGTTCACAGGAATCAGTGGCAAATAGTTCTACTGCTATCGGCTTTGACGAGAGAATGTTGTTACATGCAGAAGTTGAAAAGAAATCAACTCTGCATCCTGAGAGGCCAGATCGTCTTCAAGCCATTGCCGCTAGTCTTGCTAGAGCTGGCATATTTCCTGGAAAATGCTATTCAATTCCTGCTAGAGAAATCACACCAGAAGAACTTATTACGGTTCATTCGTTGGAGCATATTGAATCTGTGGAAGTTACAAGTGAATCACTTTCTAGTTATTTCACGTCTGATACATATGCCAATGAGCATTCAGCACTTGCTGCTAGGTTGGCAGCTGGGTTATGTGCTGATCTAGCATCAGCAATTGTTTCTGGGCGAGCCAAAAATGGATTTGCTTTGGTTAGGCCTCCTGGTCATCATGCTGGTGTAAGACAGGCAATGGGGTTCTGCCTTCACAATAATGCTGCCGTGGCTGCATTGGCAGCTCAGGCTGCAGGGGCTAGGAAGGTGCTAATTTTGGATTGGGATGTTCATCATGGAAATGGGACACAAGAAATATTTGAACAAAACAAATCTGTCTTGTATATATCATTGCATAGACATGAGGGAGGAAAGTTTTATCCTGGTACTGGAGCTGCCGAAGAGGTTGGTAGTATGGGTGCAGAAGGATTCTGTGTGAATATTCCATGGAGTCAAGGAGGAGTTGGTGACAATGACTATATTTTTGCATTTCAGCATGTTGTCCTTCCTATAGCTGCTGAGTTTAATCCAGATCTTACCATAGTATCTGCTGGATTTGATGCTGCAAGAGGTGATCCCCTAGGATGTTGTGATATTACTCCCTCTGGATATGCACATATGACAAATATGTTGAATGCCCTTTCTGGTGGAAAATTGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGTTCTATATCGTCTTCTGCAACTGCAGTAATCAAGGTATTATTGGGTGAGAGTCCTGGATGTGAACTGGAAAATAGCTTCCCTTCCAAAGCTGGCCTGCAAACTGTTCTGGAAGTGCTCAAAATTCAGATGAACTTTTGGCCTGCCTTGGGTCCCATTTTTGTGAATTTGGAGTCACAATGGAGGATGTACTGTTTTGAAAGAAAAAGGAAACAGATTAAGAAACGACGCCGAGTTCTGGTTCCAATGTGGAGGTGGGGACGAAAAAGTTTGTTATTCCATTTTCTGAACGGCCACCATAATGTAAAATCAAAGTTATGTTGA 1677 0.4323 MGSGALETNEEAENSLHKQASQVSDANDAVADPDVPAKRARLQKEQKDLTFQDIYQNDGMFDDYDDEDSDWEPFQLHNKCVEFEIKKWFCRNCTMVNLDHDDCCYICGEHKDSKILSLGFFASPLAQDEDLTEVQGIVKGLKDVGSQESVANSSTAIGFDERMLLHAEVEKKSTLHPERPDRLQAIAASLARAGIFPGKCYSIPAREITPEELITVHSLEHIESVEVTSESLSSYFTSDTYANEHSALAARLAAGLCADLASAIVSGRAKNGFALVRPPGHHAGVRQAMGFCLHNNAAVAALAAQAAGARKVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEGGKFYPGTGAAEEVGSMGAEGFCVNIPWSQGGVGDNDYIFAFQHVVLPIAAEFNPDLTIVSAGFDAARGDPLGCCDITPSGYAHMTNMLNALSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPGCELENSFPSKAGLQTVLEVLKIQMNFWPALGPIFVNLESQWRMYCFERKRKQIKKRRRVLVPMWRWGRKSLLFHFLNGHHNVKSKLC 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00122 558 ProSitePatterns Zinc finger RanBP2-type signature. 88 107 IPR001876 -
Gma05g00122 558 Coils Coil 9 29 - -
Gma05g00122 558 MobiDBLite consensus disorder prediction 1 43 - -
Gma05g00122 558 Pfam Histone deacetylase domain 176 464 IPR023801 -
Gma05g00122 558 SUPERFAMILY Arginase/deacetylase 152 498 IPR023696 -
Gma05g00122 558 PRINTS Histone deacetylase superfamily signature 278 301 IPR000286 -
Gma05g00122 558 PRINTS Histone deacetylase superfamily signature 311 326 IPR000286 -
Gma05g00122 558 PRINTS Histone deacetylase superfamily signature 399 409 IPR000286 -
Gma05g00122 558 Gene3D Histone deacetylase domain 152 503 IPR037138 -
Gma05g00122 558 PANTHER HISTONE DEACETYLASE-RELATED 13 555 - -
Gma05g00122 558 PANTHER HISTONE DEACETYLASE 13 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00122 Gma-Chr5 1225928 1233283 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00122 - - gmx:100804724 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00122 05 1225928 1233283 Gma05g00122 05 1225928 1233283 ECH
Gma17g01133 17 9819133 9827999 Gma05g00122 05 1225928 1233283 GST