Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01116 ATGACAGATGCAAAGCCAGATAAACCCTTGATGGCATCTTCATCGCGAAACCTTCCTGATTTCAAGAAGTCTGTTAAGTTGAAGTATGTCAAGCTTGGTTATCATTACCTCATCACCCATGGAATGTACCTCTGCCTTTCCCCCCTTGTGGTGCTGATTGCAGCCCAGCTTTCTACCTTCTCCCTCCGAGACTTGTATGATCTTTGGGAGCATCTACAATACAACTTGATATCTGTTATTCTTTGCTTAACTCTCCTTGTTTTCCTGTCCACCCTCTACTTTCTAACTCGTCCTCGACCTGTGTACCTTGTCAATTTCTCCTGTTACAAGCCTGAAGAATCTCGGAAGTGCACGAAAAAAATATTTATAGAGCAGTCCCGGTTGACCAGTTCTTTCACGGAGGAAAATCTTGAATTCCAGCGGAAGATTCTTGAGAGATCTGGCCTTGGGGAGAACACTTACCTTCCTGAGGCCGTCCTCAACATTCCTCCCAACCCTTCAATGAAAGAAGCTAGAAAAGAAGCCGAGACCGTGATGTTTGGTGCCATTGATGAGCTTTTAGCTAAAACCGCTGTAAAGCCTAAATACATTGGAATTCTGATTGTAAATTGTAGTCTGTTCAACCCTACTCCATCACTTTCGGCAATGATTGTCAATCATTACAAGCTTCGGGGAAATATAAAGAGCTACAATCTTGGTGGGATGGGTTGCAGTGCCGGGCTTATCTCAATTGATCTTGCTAAAGATCTTCTCCAAGCCAATCCCAACTCCTATGCATTGGTCATTAGCATGGAGAATATCACGTTGAATTGGTATTTTGGAAACGATCGGTCAAAGCTTGTCTCTAATTGTTTATTTCGTATGGGAGGAGCTGCAGTTCTGCTCTCCAATAAAAGCTCGGATAGAAGAAGATCCAAATACCGATTGGTCACCACGGTTCGCACTCATAAGGGTGCTGATGAAAAGTGCTTTAGCTGTGTAACCCAAGAAGAAGATGCTAATGGCAAGGTTGGTGTTACTTTGTCAAAAGATTTGATGGCGGTTGCTGGTGATGCTTTAAAAACCAATATCACTACACTGGGGCCTCTTGTACTTCCAACATCTGAACAGCTGCTATTCTTTGCCACATTAGTAGGGAAGAAAATTTTCAAGATGAAGATCAAACCTTATATTCCAGATTTCAAACTAGCTTTTGAACACTTTTGCATCCATGCTGGTGGTAGAGCTGTTTTGGATGAACTGGAGAAAAACTTGCAGCTATCTCCTTGGCATATGGAGCCTTCAAGAATGACACTCTATCGATTCGGAAACACCTCCAGCAGTTCACTTTGGTATGAGCTGGCTTACACTGAGGCCAAAGGGAGGATCAAAAAGGGAGACAGAACATGGCAAATTGCATTCGGTTCTGGATTCAAGTGTAACAGTGCAGTGTGGAAGGCTCTCAGGACCATCAACCCTGCTAAAGAGAAAAGTCCTTGGATTGATGAGATCGACCAGTTTCCAGTCGATGTTCCTAGGGTATCTACCATTTAA 1533 0.4331 MTDAKPDKPLMASSSRNLPDFKKSVKLKYVKLGYHYLITHGMYLCLSPLVVLIAAQLSTFSLRDLYDLWEHLQYNLISVILCLTLLVFLSTLYFLTRPRPVYLVNFSCYKPEESRKCTKKIFIEQSRLTSSFTEENLEFQRKILERSGLGENTYLPEAVLNIPPNPSMKEARKEAETVMFGAIDELLAKTAVKPKYIGILIVNCSLFNPTPSLSAMIVNHYKLRGNIKSYNLGGMGCSAGLISIDLAKDLLQANPNSYALVISMENITLNWYFGNDRSKLVSNCLFRMGGAAVLLSNKSSDRRRSKYRLVTTVRTHKGADEKCFSCVTQEEDANGKVGVTLSKDLMAVAGDALKTNITTLGPLVLPTSEQLLFFATLVGKKIFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSPWHMEPSRMTLYRFGNTSSSSLWYELAYTEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTINPAKEKSPWIDEIDQFPVDVPRVSTI 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01116 510 CDD CHS_like 83 478 - -
Gma17g01116 510 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 399 479 IPR013747 -
Gma17g01116 510 Pfam FAE1/Type III polyketide synthase-like protein 93 381 IPR013601 GO:0006633|GO:0016020|GO:0016747
Gma17g01116 510 SUPERFAMILY Thiolase-like 286 482 IPR016039 GO:0016746
Gma17g01116 510 PANTHER 3-KETOACYL-COA SYNTHASE 3 509 - -
Gma17g01116 510 PIRSF Very_long_ch_3-ktacl-CoA_syn 20 510 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gma17g01116 510 Gene3D - 104 480 IPR016039 GO:0016746
Gma17g01116 510 SUPERFAMILY Thiolase-like 87 305 IPR016039 GO:0016746
Gma17g01116 510 PANTHER 3-KETOACYL-COA SYNTHASE 3 509 IPR012392 GO:0006633|GO:0016020|GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01116 Gma-Chr17 9575493 9579246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01116 3 510 Miscellaneous Gene Families AT2G26640 85.039 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01116 K15397 - gmx:100783247 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01116 17 9575493 9579246 Gma17g01116 17 9575493 9579246 ECH
Gma17g01116 17 9575493 9579246 Gma04g01418 04 33733678 33742721 PCT