Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01418 ATGAACAATATCAATGATTATGCAGAATCCCTCTTTCAGATGTGCTCAGAAAATGGTGCAAGGCCAGAAAGAGATGAGCTTGATTTTGAGTTTTTGGGGAACAAAACAGGAGAGCTTTATTTGATTCAGACTAATGTATACAAGAATGGAACTCGTGGGCATTTAACTCCATTTTACTTTCGTCATTTTAAACCACTGCTTCAAATCTATTTAACTCTTTCTCTCTCTAATCCGCGTCTCTTTGCGTTTCACGGCCCACATTGCTGCGTTCTCTGGAGTCTTTGGCCTTTCAAGGAAAAAATGGCAGAGACAAAACCAGACACACCGTTGATGCCACCATCATCGCGGAACCTTCCAGATTTCAAGAAGTCCGTGAAATTGAAATATGTGAAGCTTGGTTATCATTACCTCATAACACATGGCATGTACCTCTTTCTTTCCCCTCTGGTGGTGCTCATTGCTGCACAGCTCTCGAGCTTCTCCCTTGAAGATCTCCATGTCATTTGGGAGAATCTACAGTACAATTTGATATCCGTTATTGTTTGTTCCACTCTCATTGTATTTTTGTCTACCCTATACATTATGACTCGTCCACGGCCCGTGTACCTTGTCAATTTCTCATGTTACAAGCCAGAAGAAGCTCGCAAATGCTCGAAGAAGATATTCATGGACCAGTCCCGGAAGAGTGGTTTTTTCACAGAGGAAACTCTTGAATTCCAGCGGAAGATTCTGGAGAGGGCTGGCCTTGGTGAAAGCACTTACTTTCCAGAGGCTGTTCTCAATGATCCTCCCAACCCTTCAATGAAAGAGGCAAGAAAAGAGGCTGAGGCTGTTATGTTTGGTGCAATTGATGAGCTGTTTGCTAAGACTTCTGTGAAGCCTAAGGACATTGGAATTCTGATTGTGAATTGCAGCCTCTTTTGCCCCACGCCATCGCTTTCGGCAATGATTATCAATCATTATAAACTTAGAGGGAACATAAAGAGTCTCAACCTTGGTGGGATGGGATGCAGTGCAGGTCTCATTTCGATTGATCTTGCTAAGGACCTTCTCCAAGTCCACCCCAATTCCTATGCATTGGTTGTTAGCACTGAGAACATCACTTTGAATTGGTACTCTGGGAATGACCGATCGAAGCTTGTTTCCAATTGTTTGTTCCGTATGGGAGGGGCTGCCATTCTGCTTTCAAACAAAGGCTCTGATAGGAGAAGATCAAAATACCAGCTGGTTGACACCGTTCGCACTAATAAGGGTTCTGATGACAAGTGCTTTGGCTGCGTTGTCCAAGAGGAAGATTCCAATGGCAAGATTGGTGTCACTTTGTCAAAAGATTTGATGGCAGTTGCTGGCGATGCTTTGAAAACCAACATCACCACATTGGGGCCTCTTGTCCTTCCAATGTCTGAACAGCTCCTGTTCTTCGCCACATTGGTTGGGAAGAAGCTTTTCAAGATGAAGATCAAGCCTTACATTCCAGACTTCAAACTGGCTTTTGAGCACTTTTGCATCCATGCTGGAGGCAGAGCCGTGTTGGATGAACTGGAGAAGAACTTGCAGCTGTCCACTTGGCATATGGAGCCATCAAGGATGACGCTTTACCGTTTCGGAAACACCTCCAGCAGTTCCCTTTGGTATGAATTGGCTTACACAGAAGCCAAAGGGAGGATCAGGAAGGGTGACAGAACATGGCAGATAGCATTCGGTTCCGGATTCAAGTGCAACAGTGCAGTGTGGAAGGCTCTCAGGACCATCAACCCTGCCAAGGAGAAGAATCCTTGGATGGATGAGATCCACAAGTTCCCAGTTGAAGTTCCAAGGATTTCGCCCCTCTAA 1833 0.4495 MNNINDYAESLFQMCSENGARPERDELDFEFLGNKTGELYLIQTNVYKNGTRGHLTPFYFRHFKPLLQIYLTLSLSNPRLFAFHGPHCCVLWSLWPFKEKMAETKPDTPLMPPSSRNLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVLIAAQLSSFSLEDLHVIWENLQYNLISVIVCSTLIVFLSTLYIMTRPRPVYLVNFSCYKPEEARKCSKKIFMDQSRKSGFFTEETLEFQRKILERAGLGESTYFPEAVLNDPPNPSMKEARKEAEAVMFGAIDELFAKTSVKPKDIGILIVNCSLFCPTPSLSAMIINHYKLRGNIKSLNLGGMGCSAGLISIDLAKDLLQVHPNSYALVVSTENITLNWYSGNDRSKLVSNCLFRMGGAAILLSNKGSDRRRSKYQLVDTVRTNKGSDDKCFGCVVQEEDSNGKIGVTLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLQLSTWHMEPSRMTLYRFGNTSSSSLWYELAYTEAKGRIRKGDRTWQIAFGSGFKCNSAVWKALRTINPAKEKNPWMDEIHKFPVEVPRISPL 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01418 610 SUPERFAMILY Thiolase-like 410 579 IPR016039 GO:0016746
Gma04g01418 610 Gene3D - 10 65 - -
Gma04g01418 610 Pfam Glycosyl hydrolases family 16 12 54 IPR000757 GO:0004553|GO:0005975
Gma04g01418 610 PANTHER 3-KETOACYL-COA SYNTHASE 11 103 608 - -
Gma04g01418 610 CDD CHS_like 186 578 - -
Gma04g01418 610 Pfam FAE1/Type III polyketide synthase-like protein 193 482 IPR013601 GO:0006633|GO:0016020|GO:0016747
Gma04g01418 610 Gene3D - 205 580 IPR016039 GO:0016746
Gma04g01418 610 PANTHER 3-KETOACYL-COA SYNTHASE 103 608 IPR012392 GO:0006633|GO:0016020|GO:0016747
Gma04g01418 610 SUPERFAMILY Thiolase-like 187 405 IPR016039 GO:0016746
Gma04g01418 610 SUPERFAMILY Concanavalin A-like lectins/glucanases 12 58 IPR013320 -
Gma04g01418 610 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 499 579 IPR013747 -
Gma04g01418 610 ProSitePatterns Glycosyl hydrolases family 16 active sites. 26 36 IPR008263 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01418 Gma-Chr4 33733678 33742721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma04g01418 103 610 Miscellaneous Gene Families AT2G26640 82.677 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01418 K15397 - gmx:100794273 1028.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01116 17 9575493 9579246 Gma04g01418 04 33733678 33742721 PCT