Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01082 ATGGAGACCAACAACAAACAACAGCAGCAGAAGAAGAAGTGGTTTATGCCACTGGTTCTGTCTCTACTACTGTCCACCCTGCTCATACTTTTTTCCATCTTCGTCTCCTCCGATTCCTCCTCTCTGCTCTACCTCTACCGTACACGTGGCAGACTCGAGGAGCCTCGTTTCGTGGAGTCAAAGCTGAGGCTGTCCGCCACGTCATCCAGCGATTCCGTTCCCAGGATCGCGTACCTGATCTCGGGGTCAATGGGCGATGGCGACACTCTGAAGAGAACCCTCAAGGCCCTTTACCATCCCAGGAACCAATACGCTGTGCACTTGGACCTCGAAGCTTCTTCTCAAGAAAGATTGGAGCTTGCAAACTTTGTGAAGAACGACCCTCTCTTTGCGGAAGTGGGCAATGTTAGGATGATTGTTAAGGCCAACTTGGTTACTTATAGAGGACCCACTATGGTCACTAATACCCTCCACGCTGCTGCCATTCTGTTAAAGGAAGGTGGACTCTGGGATTGGTTCATCAATCTCAGCGCTTCCGATTACCCTTTGATCACTCAAGATGATCTGCTGCATACACTGTCATCAATTCCAAGACACCTTAACTTTATTGAGCACACCAGTGATATTGGCTGGAAGGAAGATCAGAGAGCCAAGCCTGTTATCATTGATCCAGCTCTTTATAGTGTCAATAAGTCTGATTTATTTTGGGTGACTGAGAAAAGAAATGTTCCCACCGCATATAAGCTGTTTACAGGTTCTGCATGGATGATGCTCTCTCGCCAATTTGTTGAATATTTGTTATGGGGATGGGATAACTTGCCTAGAATTGTCTTGATGTATTATGCCAACTTTCTATCCTCCCCTGAAGGGTATTTTCACACTGTCATCTGCAATTCTGAGGAGTTCCGAAACACTACTGTGAACCATGACCTCCACTTCATATCATGGGACAACCCTCCAAAACAACATCCACATTTCCTTACAATTGATAACTACGAGCAAATGGTTGACAGCAATGCTCCGTTTGCTCGAAAATTTGGCAGGAATGAACCACTCTTGGATAAGATTGATAATGAACTCTTGAGACGAAATGAACATGGTTATGTGCCTGGCAGGTGGTTCGACCAAGCAAATCCTAACATCACCAAACCATATTCTGCCATAAGAAATATCACTGAACTTAAGCCTGGCCCTGGAGCAGAAAGGCTTAAACGCCTTATCAATGGTAGGTATAAAGAGAACATGACACGTGACATGTTTTCTTTGAATCTATTAGTCAAACATctacTGTTCCTACTCTTCTCTTCCACTCTCATCATCCTCATCTTCTTCTTCGCATTCCTCACCTCACACCCCTCAAACCCTTCAAACCCTACCTTCACCGCCTTCAACACCCGCCTCTCCTTCAATGCCAGGACTGAGGGTAAGGATGGGTTTTTTGTCGACGTTGGTGCCAACGTAGGTATGGCGTCCTTCGCCGCCTCCGCTATGGGGTTTCGGGTTCTGGCTTTCGAGCCTGTGTTCGAGAATTTGCAGAGGATCTGTGAAGGGGTTTACTTCAATAGAGTTGCGGATTTGGTCACTGTCTTCGAGGCCGCTGCGTCGGATCGCGTTGGCAACATCACCGTTCACAAGTTGGTTGGTAGGCTGGACAACAGTGCAATTTCTGCCACAGGTGCAAAGTTGGCATTTAAGTCGAATGAAGAGATAGCTTTTAAAGTACGGACCGTTCCTCTTGATGAAGTGATTCCAAAATCTGAGCGTGTGCTTCTGCTTAAAATAGATGTTCAGGGCTGGGAATATCACGTTCTTAAAGGAGCATCAAAGTTGCTCTCAAGGAAAGGAAGCCAAGCCCCATATCTCATATACGAAGAAGATGAGTGCTTATTACAGGCCAGTAATAGCAGTGCAAAAGAGATTCGAGACTTCCTCCATAGTTCCCTAGATGGAAAACCAAGTTATTGCCAGTTGACTATGTCAGCTAATTCTTGA 1992 0.4583 METNNKQQQQKKKWFMPLVLSLLLSTLLILFSIFVSSDSSSLLYLYRTRGRLEEPRFVESKLRLSATSSSDSVPRIAYLISGSMGDGDTLKRTLKALYHPRNQYAVHLDLEASSQERLELANFVKNDPLFAEVGNVRMIVKANLVTYRGPTMVTNTLHAAAILLKEGGLWDWFINLSASDYPLITQDDLLHTLSSIPRHLNFIEHTSDIGWKEDQRAKPVIIDPALYSVNKSDLFWVTEKRNVPTAYKLFTGSAWMMLSRQFVEYLLWGWDNLPRIVLMYYANFLSSPEGYFHTVICNSEEFRNTTVNHDLHFISWDNPPKQHPHFLTIDNYEQMVDSNAPFARKFGRNEPLLDKIDNELLRRNEHGYVPGRWFDQANPNITKPYSAIRNITELKPGPGAERLKRLINGRYKENMTRDMFSLNLLVKHLLFLLFSSTLIILIFFFAFLTSHPSNPSNPTFTAFNTRLSFNARTEGKDGFFVDVGANVGMASFAASAMGFRVLAFEPVFENLQRICEGVYFNRVADLVTVFEAAASDRVGNITVHKLVGRLDNSAISATGAKLAFKSNEEIAFKVRTVPLDEVIPKSERVLLLKIDVQGWEYHVLKGASKLLSRKGSQAPYLIYEEDECLLQASNSSAKEIRDFLHSSLDGKPSYCQLTMSANS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01082 663 TIGRFAM fkbM_fam: methyltransferase, FkbM family 480 614 IPR006342 -
Gma17g01082 663 PANTHER GLYCOSYLTRANSFERASE 9 409 IPR044610 GO:0015020
Gma17g01082 663 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 473 647 IPR029063 -
Gma17g01082 663 Gene3D Vaccinia Virus protein VP39 470 657 IPR029063 -
Gma17g01082 663 Pfam Methyltransferase FkbM domain 482 645 IPR006342 -
Gma17g01082 663 Pfam Core-2/I-Branching enzyme 76 335 IPR003406 GO:0016020|GO:0016757
Gma17g01082 663 PANTHER BETA-GLUCURONOSYLTRANSFERASE GLCAT14B-LIKE 9 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01082 Gma-Chr17 9278428 9285986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g01082 1 407 Glycosyltransferase AT5G15050 63.350 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01082 K20891 - gmx:100790174 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01082 17 9278428 9285986 Gma17g01082 17 9278428 9285986 ECH
Gma17g01082 17 9278428 9285986 Gma13g01481 13 29499797 29503567 GST
Gma04g01405 04 32067811 32076583 Gma17g01082 17 9278428 9285986 PCT
Gma06g02076 06 34651392 34652885 Gma17g01082 17 9278428 9285986 PCT