Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01481 ATGGAGACCAACAACAAACAGCAGAAGAAGAAGTGGTTTATTCCACTGGTTCTGTCTCTACTACTGTCCACCCTGCTCATACTTTTTTCCATCTTCGTCTCCTCCGATTCCTCCTCCCTGCTCTACCTCTACCGTACACGTGGCAGGGTGGAGGAGCCTCGTTTCGTGGAGTCAAAGCTGAGGTTGTCCGCCACGTCATCCAGTGACTCTGTTCCCAGGATCGCGTACCTGATCTCGGGGTCAATGGGCGATGGCGGCACTCTGAAGAGAACCCTCAAGGCCCTTTACCATCCCAGGAACCAATACGTTGTGCACTTGGACCTCGAAGCTTCTTCTCAAGAAAGATTGGAGCTTGCAAACTTTGTGAAGAACGAACCTCTCTTTTCCAAAGTGGGCAATGTTAGAATGGTTGTTAAGGCCAACTTGGTTACTTATAGGGGACCCACTATGGTCACTAATACTCTCCACGCTGCTGCCATTTTGTTAAAGGAAGGTGGACTCTGGGATTGGTTCATCAATCTCAGCGCTTCCGATTACCCTTTGATCACTCAAGATGATCTGCTGCACACACTGTCATCAATTCCAAGACACCTTAACTTTATTGAGCACACCAGTGATATTGGCTGGAAGGAAGATCAGAGAGCCAAGCCTGTTATCATTGATCCAGCTCTTTATAGTGTCAATAAATCTGATTTATTTTGGGTGACAGAGAAAAGAAATGTTCCCACAGCATATAAGCTGTTTACAGGTTCTGCCTGGATGATGCTCTCTCGCCAATTTGTTGAATATTTGTTATGGGGATGGGATAACTTGCCTAGAATTGTCTTGATGTATTATGCCAATTTTCTATCCTCCCCTGAAGGGTATTTTCACACAGTCATCTGCAATGCTGAGGAGTTCCGAAACACCACTGTGAACCATGACCTCCACTTCATATCATGGGACAACCCTCCAAAACAACATCCACATTTCCTTACAATTGATAACTACCAGAAAATGGTTGACAGCAACACTCCCTTTGCTCGAAAATTTGGCAGGAATGAACCACTCTTGGATAAGATTGATACTGAACTCTTGGGACGAAATGAACATGGTTATGTGCCTGGCAGGTGGTTTGACCAAGCAAATCCAAACATCACCGAATCATATTCTGCCATAAGAAATATCACTGAACTTAAGCCTGGCCCTGGGGCAGAAAGGCTTAAACGCCTTATCAATGGTTTGTTATCATCAGAAGATTTTCACACTAAGCAGTGTTCTTGA 1263 0.4497 METNNKQQKKKWFIPLVLSLLLSTLLILFSIFVSSDSSSLLYLYRTRGRVEEPRFVESKLRLSATSSSDSVPRIAYLISGSMGDGGTLKRTLKALYHPRNQYVVHLDLEASSQERLELANFVKNEPLFSKVGNVRMVVKANLVTYRGPTMVTNTLHAAAILLKEGGLWDWFINLSASDYPLITQDDLLHTLSSIPRHLNFIEHTSDIGWKEDQRAKPVIIDPALYSVNKSDLFWVTEKRNVPTAYKLFTGSAWMMLSRQFVEYLLWGWDNLPRIVLMYYANFLSSPEGYFHTVICNAEEFRNTTVNHDLHFISWDNPPKQHPHFLTIDNYQKMVDSNTPFARKFGRNEPLLDKIDTELLGRNEHGYVPGRWFDQANPNITESYSAIRNITELKPGPGAERLKRLINGLLSSEDFHTKQCS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01481 420 Pfam Core-2/I-Branching enzyme 74 333 IPR003406 GO:0016020|GO:0016757
Gma13g01481 420 PANTHER BETA-GLUCURONOSYLTRANSFERASE GLCAT14B-LIKE 7 419 - -
Gma13g01481 420 PANTHER GLYCOSYLTRANSFERASE 7 419 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01481 Gma-Chr13 29499797 29503567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01481 1 419 Glycosyltransferase AT5G15050 62.911 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01481 K20891 - gmx:100789736 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01481 13 29499797 29503567 Gma13g01481 13 29499797 29503567 ECH
Gma17g01082 17 9278428 9285986 Gma13g01481 13 29499797 29503567 GST
Gma04g01405 04 32067811 32076583 Gma13g01481 13 29499797 29503567 PCT
Gma06g02076 06 34651392 34652885 Gma13g01481 13 29499797 29503567 PCT