Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g01000 ATGGCGGAAGGTGCACGTGCGAAGAACACGACGACGACTCTCGTGCTTGCAAAGGAAAGAACTCGCCGGAAAGATTTGCTTAACGGTTTTCAACGTTACACCGATGGTTGGAATATCAGCAATGTCTATTATCTCACGTCAGTTATGTCTACTGCGGTTCCTTTTCTTTCCGTGGCTGTAGCCTGGTTCGTGATTTTTGGAATTTTTTTACTTATCATCTTAGCGTGTTGCTGCTGTTGTAACGGAGGAGATTCAAGTGATGATGGCTATTCTAAAGCACTCCATCATTTGTCCTTGACTTTGCTTATCTTCTGCACCATTGCGGCAATAGGTGGATGCGCTGTCCTGTACTCTGGTCAGGGGAAGTTTCGTGAAAGCACTTCGAACACACTTGATTACGTTGTGAATCAGGCTCAATTAGTAGCCGAAAACCTCCGGAACGTGACAAGTTATTTTGATTCAGCTAAGCAGCTTGTGAATGGGATTCCTCTGCCACTTGATCTTGGATCCAACATTGATGATGCCGCCAAAGTGAGAGTCATCACTGCTACTGATTCTCTCTCCAAAAAGGCTAAAGAAAATTCGAGGATGATACATAAAGTCATAGATGGAGTGAGACTGGCTCTTGTTATTGTTGCTGCTGTTATGATCTTTGTTGCATTGCTCGGATTGCTATTTTCTTTACTTGCTTTGCCGTGTCCTGTATACTCCTTAGTGGTTATTGGATGGATTCTTGTTACGGGCACCTTGTTACTTTGTGCTGCATTTCTTTTTAAGACTTACTTGAATATTAATGCGTATATATATATATATAACCCCACTGCCCACACTGCCTTGGACGACATTCTTCCATGCGTGGAAAATGCAACTGCCATGAAAACCCTTCTACGAAGCAAGACTCTCACATATACCATTGTTGACGCATTTGACCAAATCATTTCCAATTTCACAAATGCAAATACCACAGCTATTTTCAATCAATCAGGTCCCCTCGTCCCTCTTCTCTGCAATCCATATAATGCCGACTTCACCTCTCGCCAGTGTGCGCCAGGGGAAGTCACATTCAAAAACGCCATCGAGGTGTGGAAGAATTATACGTGCCAGGCTTCATCATCTGAACAATGTACGAATGAAGGTCGTTTGACACCGAAGATATACAACAAACTTGCATCTGCAGTGAATGTGACGGATGGTTTATTTCATTATGGGCCATTTTTCGTTGATTTAGTAGATTGCACTTTTGCACGTAAAGCATTCTCAGAGATTAGCAACAACTATTGTCCTTCTCTGCGGAGATATACTGAAAGAGTTTATTTGGGAACGGTTGTGGTATCTGCGGCCGTAATGCTCTCTTTGATATTTTGGATCGTCTTTTTCAGAGAGCAGTGGCGGCGTCTTCGCAACTGA 1407 0.4307 MAEGARAKNTTTTLVLAKERTRRKDLLNGFQRYTDGWNISNVYYLTSVMSTAVPFLSVAVAWFVIFGIFLLIILACCCCCNGGDSSDDGYSKALHHLSLTLLIFCTIAAIGGCAVLYSGQGKFRESTSNTLDYVVNQAQLVAENLRNVTSYFDSAKQLVNGIPLPLDLGSNIDDAAKVRVITATDSLSKKAKENSRMIHKVIDGVRLALVIVAAVMIFVALLGLLFSLLALPCPVYSLVVIGWILVTGTLLLCAAFLFKTYLNINAYIYIYNPTAHTALDDILPCVENATAMKTLLRSKTLTYTIVDAFDQIISNFTNANTTAIFNQSGPLVPLLCNPYNADFTSRQCAPGEVTFKNAIEVWKNYTCQASSSEQCTNEGRLTPKIYNKLASAVNVTDGLFHYGPFFVDLVDCTFARKAFSEISNNYCPSLRRYTERVYLGTVVVSAAVMLSLIFWIVFFREQWRRLRN 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g01000 468 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 8 466 IPR040283 -
Gma17g01000 468 PANTHER TRANSMEMBRANE PROTEIN 8 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g01000 Gma-Chr17 8525907 8528443 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g01000 - - gmx:100809538 751.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01000 17 8525907 8528443 Gma08g01973 08 17732792 17737999 ECH
Gma17g01000 17 8525907 8528443 Gma17g01000 17 8525907 8528443 ECH
Gma17g01000 17 8525907 8528443 Gma13g01452 13 29259924 29262970 GST
Gma17g01000 17 8525907 8528443 Gma15g01896 15 24986582 24991964 PCT
Gma17g01000 17 8525907 8528443 Gma09g00872 09 13044830 13051232 PCT
Gma15g01896 15 24986582 24991964 Gma17g01000 17 8525907 8528443 PCT
Gma09g00872 09 13044830 13051232 Gma17g01000 17 8525907 8528443 PCT