Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma08g01973 ATGATCCGTCTCAATCTTAACCTCATTCCTTCTCTTCTTACAATTTTTGTTGTCGTTATTTCATGGAACTTGTTCTCTCCCTGCCATGCGGACAATTTCGGGTTCCCAGAAGGATTCTCAGCTAAGGGATCACAAAATAGTGCAAATAACTCAACAATATTAGCCGCACAAAGAACGCGGAGGATTGACCCTAGTACTGATTTCAATTACTATGAGGGTGGATGGGATATTACCAATACACATTATTATATGTCTGTTGCTTTTTCTGGTATTTCTCCGGTTGTCATTGGAGCCGTCTGGTGTTTCATTGTGGCATTATGCTTCACCATCATAGCTCTCGTACATTGCTTATGTTGCTGCTGCTGCCGCAAGAAAAAGCCTAGGACAGATTACTCTCGAAAGACTTATGCAATATCACTCATCTTTCTCTCAGTCTTCTTGATCATGACAATCATTGGAGGGGGTTTCCTTTACACTGGACTGGGGAAATTCCAAGCTACTGCACATGATGTATCAGATATTCTGGTCACAAGAGCAACTACAGTGGTTGATATTATTCAAAATGTAATAGACAATCTTCATGCGACTAAGGACATACAAGTAGCTAGTTTCTATCTTCCAGACGATATCAAGGGAGCCATTGAAAAGGCTGAAAAATTTTCCACTCAAACTGATTATATTAAGAACCAATCAGAGGAAACAGCAAGAATCTCAATGGAATTCCTGGGCGCTATAAGTGAAAGTCTTATCATTGTTGGTACTATGATGCTTATCTTGGCTGCGGTTGGCTTCGTAATCTCAATTTTGGGGTGGAAAGTGATCGTTTATATTTTACTTTTCTTTGGGTGGATCCTCGTCACATGCACTTTTATATTAAGCGGTATATCTTTAGTTGTTCACAATGGGGTAACTgacacatgtgttgcaatggaggaatgggttcagcacccacgagataatacagctctaagcaaacttcttccttgcatggatgagaacacagcccaaaaaaccttgGACATAACCAGAAACACCTCATTCCAAGTGGTCAATTTGCTTAATGCATTTATAATTAATATAGCCAACGCCAATATGCCTCCTATACAGGCTGATAAGGACATATACTACAATCAATCTGGTCCATCCATGCCCCTCTTGTGCAATCCGTTTCTTCCTGACTTGACCGAACGAGCATGTGGTCCAATGGAAGTAGACTTAAAGGGTGCATCTATTGCCTATCAAAGTTTTTTATGTAATACATCTCCAAATGGTCGATGCATTACCATGGGGAGATTGACTCCTTCTCTCTACACAAAGGTTATGGTGGCTACCAACATGAGTGACACACTACGTCGACATGGTCCACTGTTGGCTCGTTTAGTAGATTGTTCCTTTGTTGTAGACACCTTTGATCAAATCAATAAGGATGATTGTCAAAATTTCAAGCGATACAGCAATCAAATCTTCATTGGCTTGGTGTTGGTCTCAGCTGCAGTTATGTTTTCCGTCATTTTGTGGATAGTTTTTGTTAGAGAAAGACAAGTTCAAATATCTTCAAAGAAGTTTAAGAAAACACTAGTTGAAGCTCAATAA 1593 0.3697 MIRLNLNLIPSLLTIFVVVISWNLFSPCHADNFGFPEGFSAKGSQNSANNSTILAAQRTRRIDPSTDFNYYEGGWDITNTHYYMSVAFSGISPVVIGAVWCFIVALCFTIIALVHCLCCCCCRKKKPRTDYSRKTYAISLIFLSVFLIMTIIGGGFLYTGLGKFQATAHDVSDILVTRATTVVDIIQNVIDNLHATKDIQVASFYLPDDIKGAIEKAEKFSTQTDYIKNQSEETARISMEFLGAISESLIIVGTMMLILAAVGFVISILGWKVIVYILLFFGWILVTCTFILSGISLVVHNGVTDTCVAMEEWVQHPRDNTALSKLLPCMDENTAQKTLDITRNTSFQVVNLLNAFIINIANANMPPIQADKDIYYNQSGPSMPLLCNPFLPDLTERACGPMEVDLKGASIAYQSFLCNTSPNGRCITMGRLTPSLYTKVMVATNMSDTLRRHGPLLARLVDCSFVVDTFDQINKDDCQNFKRYSNQIFIGLVLVSAAVMFSVILWIVFVRERQVQISSKKFKKTLVEAQ 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma08g01973 530 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 34 514 IPR040283 -
Gma08g01973 530 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 34 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma08g01973 Gma-Chr8 17732792 17737999 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma08g01973 - - gmx:106799643 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g01000 17 8525907 8528443 Gma08g01973 08 17732792 17737999 ECH
Gma13g01452 13 29259924 29262970 Gma08g01973 08 17732792 17737999 ECH
Gma15g01896 15 24986582 24991964 Gma08g01973 08 17732792 17737999 ECH
Gma09g00872 09 13044830 13051232 Gma08g01973 08 17732792 17737999 ECH
Gma08g01973 08 17732792 17737999 Gma08g01973 08 17732792 17737999 ECH