Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00982 ATGCCCTCAAACACATTTTCCACACCGATCTTCTTCCCTCTGTCCTCGGATCTGATGCAAAACCGTCCTAAAATGGAGTCTTTTCATCGATTTAGATTGTGGGTTTTCGTTTTTCTGTGCTTAATGTTCCAATCGGGAAATGGGTTTTACCTCCCCGGTAGTTACCCTCACAAGTACGGCATTGGGGATGAGTTATCGGTGAAGGTGAATTCTCTGACTTCAATTGAGACAGAAATGCCCTTCAGTTATTATAGTTTACCCTTCTGCAAGCCTGAGGGTGGTGTCAAGGACAGTGCTGAGAATCTCGGTGAACTCCTCATGGGGGATCGGATCGAGAACTCGCCTTACAAGTTTAAGATGTACACCAATGAGTCTGAGATATTCCTGTGTCAAGTGGAAAAGCTCTCTGATGATGAGTTCAAGATCTTGAAGAAGAGGATTGATGAGATGTATCAGGTTAATCTCATACTTGATAATTTGCCTGCCATTAGATTTACCAAGAAGGAGGAGTACTTTCTGAGGTGGACCGGGTACCCGGTTGGTATCAAGATTCAGGATGTGTATTATATGTTTAACCATCTGAGGTTTAATGTCCTTGTCCATAAGTATGAGGAGACCAATGTGGCACGTGTTATGGGGACTGGTGATGCGACCGAGATGATCCCAACAATTGGTAAGGAGGGATCTGACAAGCCTGGTTACATGGTTGTTGGGTTTGAGGTGATACCTTGTAGTATTATGCATAATGCTGATTCTGTTAAAGGGTTGAAAATGTATAACAAATACCCGTCGCCGATCAGATGCGATCCATCCACGGTGGCGATGCCTATCAAGGAAGGGCAGCCACTTACATTTACTTATGAGATCACCTTTGAGGAGAGTGATATCAAGTGGCCATCTAGATGGGATGCCTACTTGAAGATGGAGGGAGCCAAAGTTCATTGGTTCTCTATCCTCAATTCGCTTATGGTGATCACTTTTCTTGCTGGCATTGTTCTTGTTATCTTCCTGAGGACTGTTAGGAGGGATCTGACCCGGTACGAGGAGCTTGATAAGGAGGCCCAAGCGCAGATGAATGAGGAGTTATCTGGTTGGAAGCTTGTTGTGGGGGATGTTTTCCGTGCCCCATCAAATCCTGCCTTGTTGTGTATAATGGTTGGTGATGGAGTTCAAATTCTGGGGATGGCTGTTGTGACAATTTTGTTTGCTGCACTTGGATTCATGTCACCGGCCTCACGGGGAACACTTATCATAGGTATGCTGTTTTTCTACATGATACTTGGTGTTGCTGCTGGTTATGTTGCAGTTCGGCTATGGAGGACAATCGGCTGCGGTGATCAGAAGGGATGGATTTCCGTTGCATGGAAGGCTGCTTGTTTCTTCCCTGGGCACCTCACGTTGAGTATCCAGTCCGGACGAATCAAATCCCTCGAGAAATTCCCCAGCAGAGGTACCCATCATGGCTTTTGGTTCTCGGTGCTGGCACCCTCCCATTCGGTATCTCTAGTTCTAACCTACATGCACCTCTGTGTGGAGGACTGGAGATGGTGGTGGAAATCATTCTTTGCCTCTGGTTCTGTTGCCATATACATCTTTTTGTACTCCATAAACTATCTTGTATTTGATCTCAAGAATCTGAGTGGGCCAGTTTCTGCAACTCTCTACTTGGGGTATTCCCTCTTCATGGTTCTAGCAATCATGTTGGCTACAGGCACAGTTGGGTTCCTTTCCTCATTCTGGTTCGTGTATTACTTGTTTTCTTCGGTCAAATTGGATTGA 1779 0.4553 MPSNTFSTPIFFPLSSDLMQNRPKMESFHRFRLWVFVFLCLMFQSGNGFYLPGSYPHKYGIGDELSVKVNSLTSIETEMPFSYYSLPFCKPEGGVKDSAENLGELLMGDRIENSPYKFKMYTNESEIFLCQVEKLSDDEFKILKKRIDEMYQVNLILDNLPAIRFTKKEEYFLRWTGYPVGIKIQDVYYMFNHLRFNVLVHKYEETNVARVMGTGDATEMIPTIGKEGSDKPGYMVVGFEVIPCSIMHNADSVKGLKMYNKYPSPIRCDPSTVAMPIKEGQPLTFTYEITFEESDIKWPSRWDAYLKMEGAKVHWFSILNSLMVITFLAGIVLVIFLRTVRRDLTRYEELDKEAQAQMNEELSGWKLVVGDVFRAPSNPALLCIMVGDGVQILGMAVVTILFAALGFMSPASRGTLIIGMLFFYMILGVAAGYVAVRLWRTIGCGDQKGWISVAWKAACFFPGHLTLSIQSGRIKSLEKFPSRGTHHGFWFSVLAPSHSVSLVLTYMHLCVEDWRWWWKSFFASGSVAIYIFLYSINYLVFDLKNLSGPVSATLYLGYSLFMVLAIMLATGTVGFLSSFWFVYYLFSSVKLD 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00982 592 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 499 592 IPR004240 GO:0016021
Gma17g00982 592 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 34 464 IPR004240 GO:0016021
Gma17g00982 592 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 499 592 - -
Gma17g00982 592 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 34 464 - -
Gma17g00982 592 Coils Coil 337 357 - -
Gma17g00982 592 Pfam Endomembrane protein 70 499 544 IPR004240 GO:0016021
Gma17g00982 592 Pfam Endomembrane protein 70 80 468 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00982 Gma-Chr17 8384578 8386814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00982 500 592 Miscellaneous Gene Families AT5G35160 94.624 4.93e-49 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00982 K17086 - gmx:100780910 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00982 17 8384578 8386814 Gma17g00982 17 8384578 8386814 ECH
Gma17g00982 17 8384578 8386814 Gma13g01379 13 28488204 28490832 GST
Gma17g00982 17 8384578 8386814 Gma06g01997 06 25804691 25807892 PCT
Gma06g01997 06 25804691 25807892 Gma17g00982 17 8384578 8386814 PCT