Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01997 ATGGCAAGAGTTCTTCTCGCACGTAATAACCTGTGTCTGTGGATCCATGTGTATTTTTTGTTACTTGTTCATCTCCATGTTGGAACTAGTTTTTACCTTCCTGGTGTTGCACCGGAGGATTTCCACAAGGGGGATCTGTTGAGGGTGAAAGTGAACAAACTATCTTCCACAAAAACACAGCTTCCTTACTCCTACTATTCACTGCCTTACTGTCATCCAGGTCACATTGTTGACAGTGCTGAGAATCTTGGGGAAGTCCTGAGGGGTGACCGCATAGAAAACTCTCCTTACGTGTTTAAAATGAGAGAACCCCAGATGTGCAATGTTGTTTGTCGGCTAACTCTCAATGCAAAAACAGCCAAAGAGTTCAAGGAAAAGATAGATGATGAATATCGTGTGAACATGATTTTAGACAATCTTCCTTTGGTTGTTCCACTACGGCGACCAGATCGTGAGTCATCCTTGGTGTATCTGCATGGCTTCCTAGTTGGTCTTAAAGGACAGTATGCAGGAAACAAGGATGAAAAGCATTTTGTCCACAACCACTTAACATTTATAGTTAAGTATCACAGAGATCCCGTGACAGAAATGTCAAGAATTGTAGGATTTGAGGTTAAGCCTTTCAGTGTCAAGCATGAATATGATGGTGGATGGGATAATACCACACGCTTAACTACATGTGATCCTCATGCAAAAAAGTTAGTCTCAGGCTCTGAGCCTCCTCAAGAGGTTGAAGACAAGAAGGAGATAATTTTTACCTATGATGTTGAGTTCCAGGAGAGTAATGTGAAGTGGGCATCTCGCTGGGATTCCTATCTCCTAATGGCTGATGACCAAATTCACTGGTTTTCAATTATTAATTCTTTATTGATTGTACTTTTTCTATCGGGCATGGTGGCTATGATAATGTTGAGGACACTTTACCGTGATATTTCCAAGTACAATCAATTAGAGACTCAGGAGGAAGCTCAGGAAGAGTCAGGGTGGAAACTTGTCCATGGAGATGTTTTCAGGCCTCCTTCAAACTCGGATTTACTCTGTGTATATGTTGGAACTGGTGTTCAGTTTTTTGGGATGATTCTTGTCACCATGATTTTTGCTGCACTTGGATTCCTCTCCCCCTCAAATAGAGGGGGGTTGATGACTGCCATGCTCTTGCTCTGGGTCCTTATGGGACTGTATGGTGGCTACTCTTCGGCACGTCTTTATAAGATGTTAAAGGGAACAGAATGGAAAAGAATTGCTCTCAAGACAGCCTTTATGTTTCCTGCCACTGCCTTTGCAATTTTCTTTGTGTTAAATGCACTAATCTGGGGCCAGAGGTCTTCTGGGGCTGTGCCATTTGGTACAATGTTTGCTCTTGTTTTCTTATGGTTTTGCATCTCAGTTCCACTTGTGTTTCTTGGTGGTCATTTTGGTTATAAAAAGCCAGTGACTGAGGATCCTGTAAAGACCAACAAGATAGCCAGGCAGATCCCAGAGCAGCCTTGGTACATGAACTCACTCTTCTCTATTCTAATAGGAGGCATACTCCCATTTGGTGCTGTCTTCATTGAGCTTTTCTTCATTCTCACATCTATCTGGTTGCATCAATTTTATTATATATTTGGTTTCCTCTTCATTGTGTTCCTCATCCTCATTGTTACTTGTGCTGAGATCACAATAGTTCTCTGCTACTTCCAGTTGTGTAGCGAGGACTACCGTTGGTGGTGGAGGTCTTATCTCACTTCAGGTTCCTCTGCACTCTACCTTTTCCTCTATGCTGCATTTTACTTCTTCACAAAGCTTGAGATCACAAAACCAGTTTCTGGAGTCTTGTATTTTGGGTACATGCTGCTTCTTTCATATGGTTTCTTTGTGGTCACTGGTACCATTGGTTTCTATTCATGCTTCTGGTTCATAAAGCTAATCTACGCGTCAGTGAAAATTGACTGA 1935 0.4207 MARVLLARNNLCLWIHVYFLLLVHLHVGTSFYLPGVAPEDFHKGDLLRVKVNKLSSTKTQLPYSYYSLPYCHPGHIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVVCRLTLNAKTAKEFKEKIDDEYRVNMILDNLPLVVPLRRPDRESSLVYLHGFLVGLKGQYAGNKDEKHFVHNHLTFIVKYHRDPVTEMSRIVGFEVKPFSVKHEYDGGWDNTTRLTTCDPHAKKLVSGSEPPQEVEDKKEIIFTYDVEFQESNVKWASRWDSYLLMADDQIHWFSIINSLLIVLFLSGMVAMIMLRTLYRDISKYNQLETQEEAQEESGWKLVHGDVFRPPSNSDLLCVYVGTGVQFFGMILVTMIFAALGFLSPSNRGGLMTAMLLLWVLMGLYGGYSSARLYKMLKGTEWKRIALKTAFMFPATAFAIFFVLNALIWGQRSSGAVPFGTMFALVFLWFCISVPLVFLGGHFGYKKPVTEDPVKTNKIARQIPEQPWYMNSLFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFLILIVTCAEITIVLCYFQLCSEDYRWWWRSYLTSGSSALYLFLYAAFYFFTKLEITKPVSGVLYFGYMLLLSYGFFVVTGTIGFYSCFWFIKLIYASVKID 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01997 644 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 15 644 - -
Gma06g01997 644 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 15 644 IPR004240 GO:0016021
Gma06g01997 644 Pfam Endomembrane protein 70 62 600 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01997 Gma-Chr6 25804691 25807892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma06g01997 17 644 Miscellaneous Gene Families AT5G10840 79.173 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01997 K17086 - gmx:100804564 1284.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01997 06 25804691 25807892 Gma06g01997 06 25804691 25807892 ECH
Gma17g00982 17 8384578 8386814 Gma06g01997 06 25804691 25807892 PCT
Gma13g01379 13 28488204 28490832 Gma06g01997 06 25804691 25807892 PCT
Gma06g01997 06 25804691 25807892 Gma17g00982 17 8384578 8386814 PCT
Gma06g01997 06 25804691 25807892 Gma13g01379 13 28488204 28490832 PCT