Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00980 ATGGACGCCGCAGCAACAGGTTCGGAGCTGAACAAGTCCGGAAGCGGAGGTTCGGAGCGAAGTGAGGACAGCGGAGGAGGGATATTTGAGTACTCTGGCTGGGTTTATCACTTGGGAGTGAATTCCATTGGCCATGAGTACTGTCATCTCCGATTCCTCTTCATTAGGGGAAAGTATGTCTCCATGTACAAGCGTGATCCTCACGATAACCCTGGCCTCAAACCTATTAGGCAGGGAGTTGTAGGACCCACGCTAATGGTGGAGGAGCTAGGTCGTCGAAAGGTCAACAATGGGGATCTTTATGTTTTACGGTTTTTCAATCGATTAGATGAGACCAAAAAGGGAGAGATTGCTTGCGCTACAGCTGGGGATGCCAGGGGATGGATGGAAGCATTTGATCAGGCCAAGCAACAGGCTGAGTATGAGCTGTCAAGAGGAGTTAGTGCCAGAGAAAAACTAAACATGGAAGCCGAGATCAATCTTGAAGGACATCGACCTAGAGTGAGGCGATATGCCCATGGGTTGAGGAAGCTCATAAGAATTGGCCAAGGCCCAGAGAAACTGTTACGACAATCATCAAAGTTGGCTATTAGGCCTGATGGGTTTGAAGGGGACAGTGGAGATGCAGTTGAAGCACATCAATGGAAATGCGTTCTTACTGTGGCTGGTATTAGAATTTTTGAAGATGTTTCTGATCACAAGAATGGTAAGGCTGTTCTTGCAAAGTCTGTTGGTGTTATTGATGCAACTGCAGATACGGTTTTTGAAGTGATTTTGAGCACTGAACAACAGAAAAGATATGAGTGGGATACATTGATGTGTGACTTGGAGCTGATAGATTCATATGATGGACACTACGATGTTGTTTATGGGACATATGATTCTAAGTATCTATCTCGGTGGCACTCAAAGCAGGATTTTGTCTTCTCTAGGCAATGGTTTCGGGGACAAGATGGAACATATACTATCTTGCAATTTCCAGCTATACATAAGAAAAAGCCTCAAAGATCTGGATATCGACGTGCAAAAGTTAATCCATCTTCATGGGAGATTAGAAATTTGAACACATCTATGGCATCAAATAGCCCAAGATGTTTAGTGACCCACACTTTAGAGATACACTCTACGTCCTGGTGTCGATGGAAGAAGAACAAGAGCTCAAAATTTGAGAGGAGCATTCCATATGCACTATTGTGCCAAGTGTCAGGTCTGAAGGAATACATTGCAGCCAATCCTGCACTCCACCATGAAAATGCCACCACAATTGTTCATTCCAAATTGTCTGATGCTTCTATTTCTAGTGCTGAATATGAGGATGAAATGCAGGATGAGTTTTATGATGCAATTACTGCTGATTCGTCAACATCAGATGAAGAAAGTGATGATGATCAGAAGCTTGTTCTGCAGGAGGCAAGAGTCAAACTAAAGAATATTTCATGGGCAATCACAACCTTGGCTTTGATGCGAACTGCAGCTCCCGATCTAACTGAAGAATTGGATCCTCATGTAACTCATATCACAATTCCAAGTGACTTGCATGGTTCTTTGCGCAAAGGAAATGATGACAATGACACAAACTGTTGGGCTTCTCCTAGCGGAAAAGGATTTATGATTAGAGGAAAGAATTATCTTAAAGATAGTTCTAAGGTAGTTGGAGGAGATCCTCTTCTCAAGCTTGTAGCAGTTGATTGGTTTACAGTTGATAAATCCGCGGATAGAATTGCCCTTCACCCTAAATGTTTGGTTCAGTCAGAAGCTGGGAAAACGCTTCCATTTATCCTTGTCATTAATCTCCAGGTTCCTGCTAAACCAAACTACAGTCTGGTTCTATATTATGCAGCTGACAGACCGATAAATAAAAATTCTCTGTTAGCTAAGTTTGTTGATGGAAGTGATGCATTTCGGGACTCAAGATTCAAACTTATTCCAAGTATAGTTGAGGGATATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTAGGAAAAGCTGTGACTTGTAAATACTTTAGACAAGATAATTTTTTGGAGATTGACGTGGACATTGGATCATCTTCTGTAGCAAGGAGTGTCATTGGCCTTGTCCTGGGATATGTTACAAGTTTAGTTGTTGACCTTGCAATTTTGATACAGGCAAACGAAGAGGTGGAGCTGCCGGAGTACATTCTTGGAACTGTTCGATTAAACCGTTTGAAACTTGAATCTGCTGTACCATTGGAGGTTTAA 2232 0.4261 MDAAATGSELNKSGSGGSERSEDSGGGIFEYSGWVYHLGVNSIGHEYCHLRFLFIRGKYVSMYKRDPHDNPGLKPIRQGVVGPTLMVEELGRRKVNNGDLYVLRFFNRLDETKKGEIACATAGDARGWMEAFDQAKQQAEYELSRGVSAREKLNMEAEINLEGHRPRVRRYAHGLRKLIRIGQGPEKLLRQSSKLAIRPDGFEGDSGDAVEAHQWKCVLTVAGIRIFEDVSDHKNGKAVLAKSVGVIDATADTVFEVILSTEQQKRYEWDTLMCDLELIDSYDGHYDVVYGTYDSKYLSRWHSKQDFVFSRQWFRGQDGTYTILQFPAIHKKKPQRSGYRRAKVNPSSWEIRNLNTSMASNSPRCLVTHTLEIHSTSWCRWKKNKSSKFERSIPYALLCQVSGLKEYIAANPALHHENATTIVHSKLSDASISSAEYEDEMQDEFYDAITADSSTSDEESDDDQKLVLQEARVKLKNISWAITTLALMRTAAPDLTEELDPHVTHITIPSDLHGSLRKGNDDNDTNCWASPSGKGFMIRGKNYLKDSSKVVGGDPLLKLVAVDWFTVDKSADRIALHPKCLVQSEAGKTLPFILVINLQVPAKPNYSLVLYYAADRPINKNSLLAKFVDGSDAFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFRQDNFLEIDVDIGSSSVARSVIGLVLGYVTSLVVDLAILIQANEEVELPEYILGTVRLNRLKLESAVPLEV 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00980 743 Pfam START domain 240 374 IPR002913 GO:0008289
Gma17g00980 743 PANTHER PLECKSTRIN-LIKE (PH) AND LIPID-BINDING START DOMAIN PROTEIN 20 743 - -
Gma17g00980 743 CDD START 211 389 - -
Gma17g00980 743 Gene3D - 208 416 IPR023393 -
Gma17g00980 743 ProSiteProfiles START domain profile. 215 368 IPR002913 GO:0008289
Gma17g00980 743 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 20 743 IPR045096 -
Gma17g00980 743 MobiDBLite consensus disorder prediction 1 23 - -
Gma17g00980 743 SUPERFAMILY Bet v1-like 209 373 - -
Gma17g00980 743 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 528 733 IPR009769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00980 Gma-Chr17 8354535 8376467 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00980 - - gmx:100780025 1481.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00980 17 8354535 8376467 Gma17g00980 17 8354535 8376467 ECH
Gma17g00980 17 8354535 8376467 Gma13g01377 13 28459943 28478022 GST
Gma17g00980 17 8354535 8376467 Gma15g01934 15 27436910 27449714 PCT
Gma15g01934 15 27436910 27449714 Gma17g00980 17 8354535 8376467 PCT