Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01377 ATGGACGCCGTAGCAACAGGTTCGGAGCTGAACAAGTCCGGAAGCGGAGGTTCGGAACGAAGCGAGGACAGCGGAGGAGCTGGAGGAGGAGGGATATTTGAGTACTCTGGGTGGGTTTATCATTTGGGAGTGAATTCCATTGGCCATGAGTACTGTCATCTCCGATTCCTCTTCATTAGGGGAAAGTATGTCTCCATGTACAAGCGTGATCCTCACGATAACCCTGGCCTCAAACCCATCAGGCAGGGAATTGTAGGACCCACGCTAATGGTGGAGGAGCTAGGTCGTCGAAAGGTCAACAATGGGGATCTTTATGTTTTACGGTTTTACAATCGATTAGATGAGACCAAAAAGGGAGAAATTGCTTGCGCCACAGCTGGGGATGCCAGGGGATGGATGGAAGCATTTGATCAGGCCAAGCAACAGGCTGAGTATGAGCTGTCAAGAGGAGTTAGTGCCAGAGACAAACTAAACATGGAGGCCGAGATCAATCTTGAAGGACATCGACCTAGAGTCAGACGATATGCCCATGGGTTGAGGaagcttataagaattggccaagGCCCAGAGAAACTGTTACGACAATCATCAAAGTTGGCTGTTAGGCCAGAGGGGTTTGCAGGGGACAGTGGAGATGCAGTTGAAGCACATCAATGGAAATGTGTTCTTACTATGGCTGGTATTAGAATTTTTGAGGATGTTTCTGATCACAAGAATGGTAAGGGTGTTCTTGCAAAGTCTGTTGGTGTTATTGATGCAACTGCAGATACTGTTTTTGAAGTGATTTTGAGCACTGAACAACAGAAAAGATACGAGTGGGATACATTGATGTGTGACTTGGAACTGATAGATTCTTATGATGGACACTACGATGTTGTTTATGGGACATATGATTCTAAGTATCTATCCCGGTGGCACTCAAAGCAGGATTTTGTCTTCTCTAGGCAATGGTTTCGGGGACAAGATGGAACATACACTATCTTGCAATTTCCAGCTATACATAAGAAAAAGCCTCAAAGATCTGGATATCGACGTGCAAAAGTTAATCCATCTTCGTGGGAGATTAGAAATTTGAACACATCTATGGCATCAAAGAGCCCAAGATGTTTAGTGACCCACACTTTAGAGATACACTCTTCATCCTGGTGTCAATGGAAGAACAACAAGAGCTCAAAATTTGAGAGGAGCATTCCATATGCACTATTGTGCCAAGTGTCAGGTCTGAAGGAATACATTGCAGCCAATCCTGCACTCCACCATGAAAATGGCACCACAATTGTTCATTCCAAATTGTCTGATGCTTCTATTTCTAGTGCTGAATATGAGGATGAAATGCAGGATGAGTTTTATGATGCAATTACTGCTGATTCATCAACATCAGACGAAGAAAGTGATGATGATCAGAAGCTTGTTCTGCAGGAGCCAAGAGTCAAACTAAAGAATATTTCATGGGCAATCACAACCTTAGCTTTGAAGCGAACTGCAGCTCCTGATCTAACTGAAGAACTGGATCCTCATGTAACTCATATCACAATTCCAAGTGACTTGCATGGTTCTTTGTGCAAAGGAAAGGATGATAATGACACAAACTGTTGGGCTTCTCCTAGCGGAAAAGGATTTATGATTAGAGGAAAGAATTATCTTAAAGATAGTTCTAAGGTAGTTGGAGGAGATCCTCTTCTCAAGCTTATAGCAGTTGATTGGTTTACAGTTGATAAATCCGCAGATAGAATTTCCCTTCACCCTAAATGTCTGGTTCAGTCAGAAGCCGGGAAAAAGCTTCCATTTATCCTTGTCATTAATCTCCAGGTTCCTGCTAAACCAAACTACAGTCTGGTTCTATATTATGCAGCTGACAGACCGATAAATAAAAATTCTTTGTTAGCTAAGTTTGTTGATGGAAGTGATGCATTTCGAGACTCAAGATTCAAACTTATTCCAAGTATAGTTGAGGGATATTGGATGGTCAAGAGAGCTGTAGGAACCAAAGCTTGCCTCTTAGGAAAAGCTGTGACTTGTAAATACTTTAGACAAGATAATTTTTTGGAGATTGATGTGGACATTGGATCATCTTCTGTAGCCAGGAGTGTCATTGGCTTTGTCCTGGGATATGTTACGAGTTTAGTTGTTGACCTTGCAATTTTGATAGAGGCAAAAGAAGAGGCGGAGCTGCCAGAGTACATTCTTGGAACTGTTCGATTAAACCGTTTGAAACTTGAGTCTGCTGTACCATTGGAGATTGATCAGGAGAAAGAGCTTCACGTAAGCGTGAACGCTGATATGATTAGGGAGGACGAGGAGGAGCTGCAATGGGTAGCACTATTGAGATTGTCATTGCAGAAGCGCATCAACTATGCTCTCCTTCGTGCCTTCCCTTCTCACCAGCATCCTTTCTCGTTGGCATCGAGAACTTAA 2415 0.4269 MDAVATGSELNKSGSGGSERSEDSGGAGGGGIFEYSGWVYHLGVNSIGHEYCHLRFLFIRGKYVSMYKRDPHDNPGLKPIRQGIVGPTLMVEELGRRKVNNGDLYVLRFYNRLDETKKGEIACATAGDARGWMEAFDQAKQQAEYELSRGVSARDKLNMEAEINLEGHRPRVRRYAHGLRKLIRIGQGPEKLLRQSSKLAVRPEGFAGDSGDAVEAHQWKCVLTMAGIRIFEDVSDHKNGKGVLAKSVGVIDATADTVFEVILSTEQQKRYEWDTLMCDLELIDSYDGHYDVVYGTYDSKYLSRWHSKQDFVFSRQWFRGQDGTYTILQFPAIHKKKPQRSGYRRAKVNPSSWEIRNLNTSMASKSPRCLVTHTLEIHSSSWCQWKNNKSSKFERSIPYALLCQVSGLKEYIAANPALHHENGTTIVHSKLSDASISSAEYEDEMQDEFYDAITADSSTSDEESDDDQKLVLQEPRVKLKNISWAITTLALKRTAAPDLTEELDPHVTHITIPSDLHGSLCKGKDDNDTNCWASPSGKGFMIRGKNYLKDSSKVVGGDPLLKLIAVDWFTVDKSADRISLHPKCLVQSEAGKKLPFILVINLQVPAKPNYSLVLYYAADRPINKNSLLAKFVDGSDAFRDSRFKLIPSIVEGYWMVKRAVGTKACLLGKAVTCKYFRQDNFLEIDVDIGSSSVARSVIGFVLGYVTSLVVDLAILIEAKEEAELPEYILGTVRLNRLKLESAVPLEIDQEKELHVSVNADMIREDEEELQWVALLRLSLQKRINYALLRAFPSHQHPFSLASRT 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01377 804 ProSiteProfiles START domain profile. 219 372 IPR002913 GO:0008289
Gma13g01377 804 PANTHER PLECKSTRIN-LIKE (PH) AND LIPID-BINDING START DOMAIN PROTEIN 26 747 - -
Gma13g01377 804 PANTHER ENHANCED DISEASE RESISTANCE-RELATED 26 747 IPR045096 -
Gma13g01377 804 MobiDBLite consensus disorder prediction 1 26 - -
Gma13g01377 804 Pfam Protein ENHANCED DISEASE RESISTANCE 2, C-terminal 532 737 IPR009769 -
Gma13g01377 804 Pfam START domain 238 382 IPR002913 GO:0008289
Gma13g01377 804 CDD START 215 405 - -
Gma13g01377 804 SUPERFAMILY Bet v1-like 214 377 - -
Gma13g01377 804 Gene3D - 212 420 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01377 Gma-Chr13 28459943 28478022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01377 - - gmx:100801191 1466.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01377 13 28459943 28478022 Gma13g01377 13 28459943 28478022 ECH
Gma17g00980 17 8354535 8376467 Gma13g01377 13 28459943 28478022 GST
Gma13g01377 13 28459943 28478022 Gma15g01934 15 27436910 27449714 PCT
Gma15g01934 15 27436910 27449714 Gma13g01377 13 28459943 28478022 PCT