Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00962 ATGGGCCCCAAGGGGCCGGTTCGCGAGGAGGCCGGGAAGATCTTGACGGCCAATCTCAAGGGGAGGCCGGCGTTTGAGGCCGACGATCAGTCCGCCTTGATATACTTGCTGCTGTCCAAGAAGGAGAAGTGGATGGACAGGACGTTTCTTGAGAATTCGTTCTACTTGCACGGTTATTGGGCCGGGTTGGTTGATCGGTATGAGGAGATGATTGAGAAGTATCACCCAGGGTTGGGGGATGAGAGGTGGCCGTTTGTGACACATTTTGTCGGGTGTAAACCGTGTGGGAGTTACGGAGATTATCCTGTGGAGAGGTGCCTCAGTAGCATGGAGAGGGCTTTCAATTTTGCTGATAATCAGGTGCTCAAGCTCTATGGGTTCAGGCACCGTGGTCTCTTGAGTCCTAAGATCAAGAGGATCAGAAATGAGACAGTTAGTCCTTTGGAGTTTGTAGACCAGTTTGATATTCGAAGACATTCTACAGAAAACACGGAATCAAAGAGCTAG 507 0.5069 MGPKGPVREEAGKILTANLKGRPAFEADDQSALIYLLLSKKEKWMDRTFLENSFYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVSPLEFVDQFDIRRHSTENTESKS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00962 168 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 1 161 IPR008630 GO:0016021|GO:0016757
Gma17g00962 168 Pfam galactosyl transferase GMA12/MNN10 family 17 97 IPR008630 GO:0016021|GO:0016757
Gma17g00962 168 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 4 1 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00962 Gma-Chr17 8194677 8195183 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00962 1 163 Glycosyltransferase AT1G74380 85.276 6.94e-104 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00962 K08238 - gmx:100819400 353.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00962 17 8194677 8195183 Gma05g00244 05 2210953 2212296 GST