Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00244 ATGGGGCAAGAGAACCAccaccacaagcgcagcaccggcgtgggcttgccgacctccaacgcgcgaagccgcggcggcaacgcgcttccccgcggccgccagatccagaagaccttcaacaacatcaagatcaccatcctctgcggcttcgtcaccatcctcgtcctccgcggcaccatcggtgtcaacctcggttcctccgacaacgacgccgtcaaccagaatctcatcgaggagaccaaccgcatcctcgccgagatccgatccgacgccgacccttccgatcccgacgaccagcaattcttcaaccctaacgacaccttcaccctcggccccaagatcgctagttgggacacagagcgcaaaaattggcttcaccaaaaccctgagtaccctaatttcgtcagagattacacgggattgaaattGAACTGTCAGTGGTCTTTGGATTTGCTTGATGATTGGGCTCCCATGGGCCCCAAGGGGCCGGTGCGCGAGGAGGCCGGGAAGATCTTGACGGCCAATCTCAAGGGGAGGCCGGCGTTTGAGGCTGATGATCAGTCCGCATTGATATACTTGTTGCTGTCCAAGAAGGAGAAGTGGATGGACAAGGTGTTTCTTGAGAATTCATTCTACTTGCACGGTTACTGGGCCGGGTTGGTTGATCGGTATGAGGAGATGATTGAGAAGTATCACCCAGGGTTGGGGGATGAGAGGTGGCCGTTTGTTACACATTTTGTTGGATGTAAGCCGTGTGGGAGCTATGGAGATTATCCTGTGGAGAGGTGCCTCAGTAGCATGGAGAGGGCTTTCAATTTTGCAGATAATCAGGTGCTCAAGCTCTATGGGTTCAGGCACCGTGGTCTCTTGAGTCCTAAGATCAAGAGGATCAGAAATGAGACAGTTAGTCCTTTGGAGTTTGTAGACCAGTTTGATATTCGAAGACATTCTACGGAAAACACGGAATCAAAGAGCTAG 978 0.2883 MGQENHHHKRSTGVGLPTSNARSRGGNALPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGSSDNDAVNQNLIEETNRILAEIRSDADPSDPDDQQFFNPNDTFTLGPKIASWDTERKNWLHQNPEYPNFVRDYTGLKLNCQWSLDLLDDWAPMGPKGPVREEAGKILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSFYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAFNFADNQVLKLYGFRHRGLLSPKIKRIRNETVSPLEFVDQFDIRRHSTENTESKS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00244 325 MobiDBLite consensus disorder prediction 1 32 - -
Gma05g00244 325 Pfam galactosyl transferase GMA12/MNN10 family 144 254 IPR008630 GO:0016021|GO:0016757
Gma05g00244 325 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 143 319 IPR008630 GO:0016021|GO:0016757
Gma05g00244 325 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 11 136 IPR008630 GO:0016021|GO:0016757
Gma05g00244 325 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 143 319 - -
Gma05g00244 325 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 3-RELATED 11 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00244 Gma-Chr5 2210953 2212296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00244 144 320 Glycosyltransferase AT1G74380 87.006 2.33e-114 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00244 K08238 - gmx:100793238 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00244 05 2210953 2212296 Gma05g00244 05 2210953 2212296 ECH
Gma17g00962 17 8194677 8195183 Gma05g00244 05 2210953 2212296 GST