Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00935 ATGGTTGGCGACAACACGAAGAAGTTGAAAGTCGCCGAGAATTTGGAGGATAGCATCGACGGCGAACTCGTCCTCTCCATCGAGAAGCTGCAAGAAGTCCAAGACGAGCTCGATAAGATCAATGAAGAGGCGAGTGATAAGGTCCTCGAAGTAGAGCAGAAGTACAATGAGATAAGGAAGCCAGTTTACGATAAGCGAAATGATGTCGTCAAATCTATTCCTGATTTCTGGTTCACTGCTTTTATGAGTCATCCTGCCCTTTGTGAACTTCTGAACGTAGAGGATCAAAAGATATTTAAGTATTTGGGTTCTCTTGATGTTGAAGATAATAAAGATGTCAAATCAGGCTACTCAATCACCTTTAATTTCAATCCCAATCCCTATTTTGAGAATACAAAGCTTACAAAGACTTTTACCTTCCTTGAAGAAGGAACAACAAAGATAACTGCTACCCCCATAAAATGGAAAGAGGGCAATGGATTACCCAATGGACTTGATCATGACAAGAATGGGAACAAGCGGGCTCGTATTGATATCAGTTTCTTTAGTTGGTTTAGTGACTGTGAGCAGAAAGATGATGTGGATGAAATTCATGACGAGGTTGCAGAATTAATCAAGGATGATTTATGGCCAAATCCACTCACTTATTTCAACAATGAGCTTGATGAAGAGGATGTTGATTCTGAAGCTGATGATGAGGAAAACGATGAGGATGACTCTGAAGATGATGACCAAGAGGAGAATGACGCTGGGAGTGAGGATGGCAATCACAGTTGA 777 0.4118 MVGDNTKKLKVAENLEDSIDGELVLSIEKLQEVQDELDKINEEASDKVLEVEQKYNEIRKPVYDKRNDVVKSIPDFWFTAFMSHPALCELLNVEDQKIFKYLGSLDVEDNKDVKSGYSITFNFNPNPYFENTKLTKTFTFLEEGTTKITATPIKWKEGNGLPNGLDHDKNGNKRARIDISFFSWFSDCEQKDDVDEIHDEVAELIKDDLWPNPLTYFNNELDEEDVDSEADDEENDEDDSEDDDQEENDAGSEDGNHS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00935 258 Coils Coil 23 54 - -
Gma17g00935 258 MobiDBLite consensus disorder prediction 212 258 - -
Gma17g00935 258 MobiDBLite consensus disorder prediction 220 250 - -
Gma17g00935 258 Gene3D - 3 73 - -
Gma17g00935 258 Gene3D Nucleosome assembly protein 74 221 - -
Gma17g00935 258 SUPERFAMILY NAP-like 13 218 IPR037231 -
Gma17g00935 258 Pfam Nucleosome assembly protein (NAP) 71 219 IPR002164 GO:0005634|GO:0006334
Gma17g00935 258 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 247 IPR002164 GO:0005634|GO:0006334
Gma17g00935 258 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00935 Gma-Chr17 7994261 7998157 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00935 K11290 - gmx:100810307 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00266 05 2408976 2412908 Gma17g00935 17 7994261 7998157 ECH
Gma17g00935 17 7994261 7998157 Gma17g00935 17 7994261 7998157 ECH
Gma17g00935 17 7994261 7998157 Gma05g00266 05 2408976 2412908 GST
Gma04g01653 04 44924860 44929358 Gma17g00935 17 7994261 7998157 PCT