Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma04g01653 ATGGTGGCTGACAGGAGCAAGAAGCCGAAGGTCTCCGACAAGGGCGAAAACCTCGATGAAATCGACGGAGAACTCGTCCTCTCCATCGAGAAGTTGCAGGAGATCCAAGACGAGCTTGAAAAGATCAACGAGGAAGCCAGTGACAAAGTTCTGGAAATAGAGCAGAAGTACAATGAGATACGGAAGCCCGTTTATGATAAGCGCAATGATATTATCAATGCCATTCCTGATTTCTGGTTAACTGCTTTTTTGAGTCATCCTGCTCTTGGTGATCTTTTGAACGAGGAAGATCAGAAGATATTTAAGTATTTGAGTTCTCTTGAGGTTGAAGATTTTAAAGATGTCAAATCAGGCTACTCAATCACCTTTAATTTCAATGCCAATCCCTATTTCGAGGATACAAAACTTGTAAAGACTTATACCTTTCTTGAGGAAGGAACAACTAAGGTTACTGCTACACCCATAAAATGGAAAGAGGGCAAAGGCATACCCAATGGAGTTAATCATGAAAAAAAAGGGAACAAGCGTGCTCCTACTGATGTCAGCTTCTTTAGTTGGTTTAGTGACACTGAGCAGAAAGATGATATTGATGACATTCATGATGAGGTTGCAGAATTGATCAAGGATGATTTATGGCCAAACCCACTTACCTATTTCAACAATGAAGAACCTGATGAAGAGGAAGGTGATGAGGATGAAGCTGATGATGAGGGAAAGGAGGATGAGTCTGATGATGATGACGACAATCAAGAGGATGACGATGAGGGTGAGGAGGATGCCAAGTGA 786 0.4186 MVADRSKKPKVSDKGENLDEIDGELVLSIEKLQEIQDELEKINEEASDKVLEIEQKYNEIRKPVYDKRNDIINAIPDFWLTAFLSHPALGDLLNEEDQKIFKYLSSLEVEDFKDVKSGYSITFNFNANPYFEDTKLVKTYTFLEEGTTKVTATPIKWKEGKGIPNGVNHEKKGNKRAPTDVSFFSWFSDTEQKDDIDDIHDEVAELIKDDLWPNPLTYFNNEEPDEEEGDEDEADDEGKEDESDDDDDNQEDDDEGEEDAK 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma04g01653 261 Gene3D - 1 75 - -
Gma04g01653 261 Coils Coil 25 59 - -
Gma04g01653 261 MobiDBLite consensus disorder prediction 211 261 - -
Gma04g01653 261 Gene3D Nucleosome assembly protein 76 223 - -
Gma04g01653 261 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 251 - -
Gma04g01653 261 SUPERFAMILY NAP-like 9 220 IPR037231 -
Gma04g01653 261 MobiDBLite consensus disorder prediction 221 261 - -
Gma04g01653 261 Pfam Nucleosome assembly protein (NAP) 29 74 IPR002164 GO:0005634|GO:0006334
Gma04g01653 261 Pfam Nucleosome assembly protein (NAP) 74 221 IPR002164 GO:0005634|GO:0006334
Gma04g01653 261 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 251 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma04g01653 Gma-Chr4 44924860 44929358 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma04g01653 K11290 - gmx:100808081 452.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01734 06 17563222 17567245 Gma04g01653 04 44924860 44929358 ECH
Gma04g01653 04 44924860 44929358 Gma04g01653 04 44924860 44929358 ECH
Gma04g01653 04 44924860 44929358 Gma17g00935 17 7994261 7998157 PCT
Gma04g01653 04 44924860 44929358 Gma05g00266 05 2408976 2412908 PCT