Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00927 ATGTCTAAGGTATTCTTGTTGTTATGTTTTCTCCCTGGGCTACTCCTTGTTCAGGCACATAAACATCATAAGAAAATTGGGTTTTATGAACTGAAGAGAGGAGATCTTAGGTTGAATTTGACAAATTACGGTGCTACAATTATCTCAGTCATAACACCTGATAAACATGGGAAATTAGCCGATATTGTTCTTGGCTACGATTCCATTGATTCTTATAAGAATGATACAGTTTACTTCGGTGCCCTTATTGGACGTGTGGCAAATAGGATTAGAGGAGCTAAATTCACTTTGGATGGCAAAACCTACAAATTGCCCGCTAATGATCACGGGAACACACTTCACGGTGGCGCAAGAGGCTTCGGTGATGTTGTATGGTCTGTGGAATCCCACAAGAAACACCGTCACGTGACATTTACCTACGATAGTTTTGAAAATGAACAAGGCTTTCCTGGAAAACTTAAGGTCTCAGTGACTTACATGCTCATTGGAAGACACAAATTGGCAGTGAAAATGATAGCAAAGCCAGTGGACAAAGCCACACCAGTGAATCTAGCACAGCATACTTACTGGAACCTTAGGGGCCACAACAGTGGTGACATTCTTTCTCACACTGTTCAGATCTTTGGCTCACACATCACACCAGTGGACAGGCTTCTCATCCCCACCGGCGAAATCATATCTGTTAAGGGCACCCCTTATGATTTCCTTGAACCAAAAAAAGTTGGAAGCCAGATTCAGGAAGGTCTATATGACATGAACTATGTGCTAGACAAAAGTTTCAAAAAGCACTTAAGTAAGGTTGTTGTGGTGACAGACCCTGTCTCTGGGAGGAAATTGGAGCTTTGGTCAAACCAACTTGGTCTGCAGTTCTATACTAGTGGCCAGTTGAATGCTACCAAAGGCAAGGATGGAGCCGTATACCGCAAGCATGCCGGCATTGCCTTGGAGACACAGGGTTTCCCAGATTCTGTGAATTACCCTTACTTTCCATCCCAGATTGTGAGGCCTGGGGAGATTTATAAGCACACCATGCTTTACAGATTCACAACTAGCTAA 1056 0.4328 MSKVFLLLCFLPGLLLVQAHKHHKKIGFYELKRGDLRLNLTNYGATIISVITPDKHGKLADIVLGYDSIDSYKNDTVYFGALIGRVANRIRGAKFTLDGKTYKLPANDHGNTLHGGARGFGDVVWSVESHKKHRHVTFTYDSFENEQGFPGKLKVSVTYMLIGRHKLAVKMIAKPVDKATPVNLAQHTYWNLRGHNSGDILSHTVQIFGSHITPVDRLLIPTGEIISVKGTPYDFLEPKKVGSQIQEGLYDMNYVLDKSFKKHLSKVVVVTDPVSGRKLELWSNQLGLQFYTSGQLNATKGKDGAVYRKHAGIALETQGFPDSVNYPYFPSQIVRPGEIYKHTMLYRFTTS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00927 351 PANTHER ALDOSE 1-EPIMERASE 3 350 - -
Gma17g00927 351 PIRSF GALM 16 351 IPR015443 GO:0016853|GO:0019318
Gma17g00927 351 CDD galactose_mutarotase_like 29 348 - -
Gma17g00927 351 Pfam Aldose 1-epimerase 29 347 IPR008183 GO:0005975|GO:0016853
Gma17g00927 351 Gene3D - 16 350 IPR014718 GO:0030246
Gma17g00927 351 PANTHER ALDOSE-1-EPIMERASE 3 350 - -
Gma17g00927 351 SUPERFAMILY Galactose mutarotase-like 20 348 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00927 Gma-Chr17 7918780 7921079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00927 1 349 Miscellaneous Gene Families AT3G47800 58.689 8.67e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00927 K01785 - gmx:100806956 715.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00276 05 2487754 2490207 Gma17g00927 17 7918780 7921079 ECH
Gma17g00927 17 7918780 7921079 Gma17g00927 17 7918780 7921079 ECH
Gma17g00927 17 7918780 7921079 Gma05g00276 05 2487754 2490207 GST