Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00276 ATGTCTAAGAATGATACAGTTTACTTCGGTGCCCTTATTGGACGTGTGGCAAGTAGGATCGGAGGAGCTAAATTCACTTTGGAAGGCAAAACCTACAAATTGCCCGCTAATGATCACGGGAACACACTTCACGGTGGCGCAAGAGGCTTCAGTGATGTCATATGGCTTTCATGGAAAACTAAGGTCTCAGTGACTTACATGCTCATTGGAACACACGAATTTGGTGTGAAAATGATAGCAAAGCAAGTGGACAAAGCCACACCAGTGAATCTAGCGCAGCATACTTACTGGAACCTTAGGGGCCACAACAGTGGTGACATTCTTTCTCACACTGTTCAGATCTTTGGCTCACACATCACACCAGTGGACAAGCTTCTCATCCCCACTGGCGAAATCATATCTGTTAAGGGCACCCCATATGATTTCCTTGAACCAAAAAAAGTTGGAAGCCAGATTCAGGAAGGTCTATATGACATGAACTATGTGCTAGACAAAAGTTTCCAAAAGCACTTAAGTAAGGCTGCTGTGGTGATAGACCCTGTCTCTGGGAGGAAATTGGAGCTGTGGTCAAACCAACTTGGTCTGCAGTTCTATACTAGTGGCCAGTTGAATGCTACCAAAGGCAAGGATGAAGCCCTATACGGCAAGCATGCCGGCATTGCCTTGGAGACAAAGGGTTTCCCAGATTCTGTGAATTACCCTTACTTTCCATCACAGATTGTGAAGCCTGGGGAGATTTACGAGCACACCATGCTTTACAAATTCACAGCTAACTAA 777 0.453 MSKNDTVYFGALIGRVASRIGGAKFTLEGKTYKLPANDHGNTLHGGARGFSDVIWLSWKTKVSVTYMLIGTHEFGVKMIAKQVDKATPVNLAQHTYWNLRGHNSGDILSHTVQIFGSHITPVDKLLIPTGEIISVKGTPYDFLEPKKVGSQIQEGLYDMNYVLDKSFQKHLSKAAVVIDPVSGRKLELWSNQLGLQFYTSGQLNATKGKDEALYGKHAGIALETKGFPDSVNYPYFPSQIVKPGEIYEHTMLYKFTAN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00276 258 Gene3D - 59 258 IPR014718 GO:0030246
Gma05g00276 258 Gene3D - 2 58 IPR014718 GO:0030246
Gma05g00276 258 CDD galactose_mutarotase_like 4 255 - -
Gma05g00276 258 Pfam Aldose 1-epimerase 58 254 IPR008183 GO:0005975|GO:0016853
Gma05g00276 258 Pfam Aldose 1-epimerase 3 55 IPR008183 GO:0005975|GO:0016853
Gma05g00276 258 PANTHER ALDOSE 1-EPIMERASE 3 56 - -
Gma05g00276 258 PANTHER ALDOSE 1-EPIMERASE 60 258 - -
Gma05g00276 258 SUPERFAMILY Galactose mutarotase-like 4 255 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gma05g00276 258 PANTHER ALDOSE-1-EPIMERASE 3 56 - -
Gma05g00276 258 PANTHER ALDOSE-1-EPIMERASE 60 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00276 Gma-Chr5 2487754 2490207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00276 3 258 Miscellaneous Gene Families AT3G47800 56.940 5.18e-110 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00276 K01785 - gmx:100806956 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00276 05 2487754 2490207 Gma17g00927 17 7918780 7921079 ECH
Gma05g00276 05 2487754 2490207 Gma05g00276 05 2487754 2490207 ECH
Gma17g00927 17 7918780 7921079 Gma05g00276 05 2487754 2490207 GST