Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00905 ATGACAGGCGTAGAGACAATGGGAAAAAATGAGAATCAAAGTGTGGAAAAAAATGAGAAAAGTGTCATAGATGAGGAGCCAAAGATTAACTACAGAGGATGGAAAGTCATGCCCTTTATCATTGGGAATGAAACTTTTGAGAAGCTAGGAACCATTGGAACCTTAGCCAACCTCTTGGTCTATCTCACAACCGTCTTCAACTTGAGCAGTCTTACAGCTACAAATATTATTAACATCTTCACTGGCAGCGCCAGTTTATCTACCTTGCTTGGGGCTTTTCTTTGTGACACTTATTTTGGCCGCTACAAGACACTGGGATTCTGCACAATTGCTTCTTTTCTGGGGTTGCTTGTTATACAACTAACAGCATGGATTAAGAAAATGCATCCACCTCACTGTGGAAGTGAGAGCATCACATGCACAGGCCCAACCACAGGGCAAATGACATTTCTGCTTGCTGGATTTGGACTTCTAATTGTGGGAGCTGCAGGGATCAGACCTTGTAACTTAGCATTTGGAGTTGATCAGTTCAACCCCAACACTGAGTCTGGAAAAAAGGGAATCAACAGCTTCTTCAATTGGTACTTCTTTACCTACACATTTGCTCAAATGGTGTCTTTGTCACTAATTGTCTACATACAGTCAAACGTTAGCTGGGCAATAGGGTTGGGAATTCCTGCGGCTTTGATGCTAATCTCTTGCACACTCTACTACACGGGAAGCAATTATTACGTGAAAGTTAAAGCAACTGGTCCAGCTCCACTAACAAGTTTAGCTCAAGCTGTAGTTGTGGCTATAAAGAAAAGAAGACTGAATCTATCAGAATATCCACTGGATTCTTCGCTCTTTGCCTATGTTTCTCCCCAGTCTATTAACTCCAAGCTTCTTCACACGTCTCAGTTCAGGTTCCTAGACAAAGCTGCAATTATAACCCCACAAGACGGCATAAACCCAGACGGGTCTGCATCAGATCCTTGGAGTCTTTGCAGCATGCAACAAGTGGAAGAGCTAAAATGCTTGCTGAGAGTGATCCCCATTTGGTTCGCAGGAATTTTCTTCTACATTGCAATAGTCCAACAGAACACAATGCTGGTCTTCCAAGCCCTTCAATCCGACAGACGCATTCTCAGCACCAACTTCAAGATCCTAGCAGCCTCCTACACCATCTTCCAGATGCTGAGCCTAACCATATGGCTACCCATCTACGACCGAATCCTCGTGCCGTCGCTCCAAAGGGTCACCAAAAAAGAGGGTGGCATCACAGTTCTTCAAAGAATAGGCTTTGGCATGTTCCTCTCTATACTATGCACAATGGTGTCTGGTGTAGTGGAAGAAAGAAGAAGGACATTGGCTTTGACCAATCCTATTGGATTAGAGCCAAGAAAAGGTGCCATTTCTTCAATGTCAGGTCTATGGTTGGTTCCTCAGCTAACACTGGCAGGGTTATCTGATGCATTCGCGATTGTGGGACAAGTTGAGTTTTTCTACAAACAGTTTCCAGAGAACATGAAAAGCCTTGCAGCGTCTCTATTTTTCTGTGGCCTCGCGGGATCAAGTTATTTGAGTAGTTTGCTGATTTCTATTATCCATAGGGCGACAGCTAAATCTTCAACTGGGAATTGGTTACCTCAGGATCTCAATAAGGGGAGATTGGATTATTTTTATTACATTATAACTGCTCTAGAAGTCGTTAATTTCGGTTACTTTATATTGTGTGCCAAGTGGTATAAATACAAAGGGACTGGTTCTAGCAGCAGTGGTGACCTTCAACTCGATCAAGTATCCAAACCATCCGAAAGAACTGTTAACACTGTCTAG 1818 0.4318 MTGVETMGKNENQSVEKNEKSVIDEEPKINYRGWKVMPFIIGNETFEKLGTIGTLANLLVYLTTVFNLSSLTATNIINIFTGSASLSTLLGAFLCDTYFGRYKTLGFCTIASFLGLLVIQLTAWIKKMHPPHCGSESITCTGPTTGQMTFLLAGFGLLIVGAAGIRPCNLAFGVDQFNPNTESGKKGINSFFNWYFFTYTFAQMVSLSLIVYIQSNVSWAIGLGIPAALMLISCTLYYTGSNYYVKVKATGPAPLTSLAQAVVVAIKKRRLNLSEYPLDSSLFAYVSPQSINSKLLHTSQFRFLDKAAIITPQDGINPDGSASDPWSLCSMQQVEELKCLLRVIPIWFAGIFFYIAIVQQNTMLVFQALQSDRRILSTNFKILAASYTIFQMLSLTIWLPIYDRILVPSLQRVTKKEGGITVLQRIGFGMFLSILCTMVSGVVEERRRTLALTNPIGLEPRKGAISSMSGLWLVPQLTLAGLSDAFAIVGQVEFFYKQFPENMKSLAASLFFCGLAGSSYLSSLLISIIHRATAKSSTGNWLPQDLNKGRLDYFYYIITALEVVNFGYFILCAKWYKYKGTGSSSSGDLQLDQVSKPSERTVNTV 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00905 605 Gene3D MFS general substrate transporter like domains 7 583 IPR036259 -
Gma17g00905 605 MobiDBLite consensus disorder prediction 583 605 - -
Gma17g00905 605 CDD MFS_NPF1_2 37 576 - -
Gma17g00905 605 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 20 587 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma17g00905 605 MobiDBLite consensus disorder prediction 1 21 - -
Gma17g00905 605 SUPERFAMILY MFS general substrate transporter 25 577 IPR036259 -
Gma17g00905 605 Pfam POT family 103 541 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma17g00905 605 PANTHER PEPTIDE/NITRATE TRANSPORTER 20 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00905 Gma-Chr17 7732530 7736043 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00905 13 602 Organic Solute Cotransporters AT5G62680 57.264 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00905 - - gmx:100101839 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00905 17 7732530 7736043 Gma17g00905 17 7732530 7736043 ECH
Gma17g00905 17 7732530 7736043 Gma05g00294 05 2650273 2652762 GST