Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00294 ATGGAGAATGTGATGAACACTGATTCTCATTGTGCACTAGAGTTAGAACATGAGCGAACACCCGCACCACCCtctgcttcttctgcttcttctgcttcatctgcttcATCAAGAGAAGCAGGAGGGTGGAGATCCATCAAATACATCATTGGTAATGAGTCCTTCGAGAAATTGGCATCCATGAGTTTGATATCAAATCTGACCGTGTACCTGGTGACGAATTACAACCTGAGTGGCATATTTGTGATTCCGGACCCTCCTCTATGGCTGTTTTTCATCACTTCTGCAGGTATACATCAACTGAGACCACATACCTGCCAGGACAAGGAGAGACCTCATTGTCAATTGCCACAAGCCTGGCAGTTAGCTGTCCTCTTTGCAGGCCTTGGACTGTTATCCATAGGAGCTGGTGGCATTAGGCCATGCAACATTGCTTTTGGTGCTGACCAATTTGACACCAACACAGAGAAGGGAAGGGAACAACTTGAGAGCTTCTTCAATTGGTGGTACTTCACTTTCACCATTGCACTTGTTATAGCCCTCACTGCTGTTGTCTATATCCAAACCAACATAAGCTGGACCTTAGGATTTGCAATTCCAACTGCTTGTCTTGGTTTCTCAATTACCATCTTCCTACTCGGCCGCCACACTTACATTTGCAAGAAGCCTCAAGGGAGCATCTTCACAGACATGGCTAAAGTCATTGCGGCGGCGTTTAGAAAACGCAACATTCAGGCTTCTGGTAGAGCCATTTACAATCCTACTCCTGCTTCTACATTGGAGAAGGATAGGATAGTTCAGACGGATAGATTCGAGTTCCTTGACAAGGCTGCTATAATAGCTGATCCTAGTGAGTTGAATGAGCAAGGCATGGCTAGGAATGTTTGGAGGCTCTGTAGTTTGCAACAAGTGGAACACTTCAAGTGCTTGCTGGGAATTCTGCCAGTGTGGGTGGCAGGAATTTGTTGCTTCATTGTGATGGACCAGCAGAACACTTTTGGTGTGCTTCAAGTTGTTCAAACCAAAAGGTCTATTGGACCACACTTCAAGGTCCCACCAGGGTGGATGAACTTGACATCAATGATAGCACTCTCCATTTGGATATACATTTATGAGCGTGTCTACATTCCCCTAGTGAGGAAGATCACCAAAAAGCCTCCAAGATTGAGCATGAGGCAAAGAATCAGAATTGGCATCTTGCTGTCCATCTTATGCATGTTGGTAGCAGCAATTGTTGAAAAGAAGCGTCGCGACTCGGCCTTAAAACATGGCTTGTTCATTTCACCATTGAGCTTTGCATTGTTGATGCCTCAGTTTGCACTGTCAGGCCTCAATGAGGCCTTTGCTTCTGTTGCTATAATGGAATTCTTCACCTTGCAGATGCCAGAGAGCATGAGAACTGTTGCTGGGGCATTGTTTTATCTGAGCTTGTCCGTTGCAAACTACATAGGGTCCTTGATTGTCAATATTGTCCACAAAGCAACATCACAAAGGGGGAAAACAGCATGGATAGGGGGTCATGATTTGAATATGAATAGGCTTGACTACTACTATTATTTCATTTCTGCACTTGGAGTTTTGAATTTTATCTACTTCAATATCTTTGCAATCCGTTATATAATTAGTGACGAGGAGAACGGGATCACAGATGTGCAGCCAGAGAATTCAATTGCTGTGGGAGAATAA 1686 0.4348 MENVMNTDSHCALELEHERTPAPPSASSASSASSASSREAGGWRSIKYIIGNESFEKLASMSLISNLTVYLVTNYNLSGIFVIPDPPLWLFFITSAGIHQLRPHTCQDKERPHCQLPQAWQLAVLFAGLGLLSIGAGGIRPCNIAFGADQFDTNTEKGREQLESFFNWWYFTFTIALVIALTAVVYIQTNISWTLGFAIPTACLGFSITIFLLGRHTYICKKPQGSIFTDMAKVIAAAFRKRNIQASGRAIYNPTPASTLEKDRIVQTDRFEFLDKAAIIADPSELNEQGMARNVWRLCSLQQVEHFKCLLGILPVWVAGICCFIVMDQQNTFGVLQVVQTKRSIGPHFKVPPGWMNLTSMIALSIWIYIYERVYIPLVRKITKKPPRLSMRQRIRIGILLSILCMLVAAIVEKKRRDSALKHGLFISPLSFALLMPQFALSGLNEAFASVAIMEFFTLQMPESMRTVAGALFYLSLSVANYIGSLIVNIVHKATSQRGKTAWIGGHDLNMNRLDYYYYFISALGVLNFIYFNIFAIRYIISDEENGITDVQPENSIAVGE 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00294 561 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 32 89 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma05g00294 561 PANTHER PROTEIN NRT1/ PTR FAMILY 2.8 32 89 - -
Gma05g00294 561 SUPERFAMILY MFS general substrate transporter 118 536 IPR036259 -
Gma05g00294 561 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 95 544 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma05g00294 561 Pfam POT family 98 504 IPR000109 GO:0016020|GO:0022857|GO:0055085
Gma05g00294 561 PANTHER PROTEIN NRT1/ PTR FAMILY 2.8 95 544 - -
Gma05g00294 561 Gene3D MFS general substrate transporter like domains 88 546 IPR036259 -
Gma05g00294 561 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00294 Gma-Chr5 2650273 2652762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00294 27 545 Organic Solute Cotransporters AT5G28470 51.872 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00294 - - gmx:102670465 1043.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00905 17 7732530 7736043 Gma05g00294 05 2650273 2652762 GST