Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00846 ATGCCCTCCATGAAGACCTCATCGTCCAAAACCTCCGAGTCCTCGACTCAGTTCGACTCGCCCCACTCGCCTCTCCGATCCTTCCCGCTCTTCGACAACGCCGACCCCTTCCACTCGCCGCAAAATGACAACTCCCGCGCCATCGTCATCGTCGAGACAACTTCGACTCAATTCGCCCAGGCCGCGCCCCCCGCGCCGGAGTCCGAGCACCGGAACCCGCCTCCGGAGGCCGTGGTCACCCGCCCCGTTTGGCCGGAGACGAAGTCGTCGGCCACCGTTGGTCGGACGCGACCGAGGCCGGTGGCGCCGCCCAGTTCGGTGGTGCCGAAGAGAGAAATGATGGCGAAAAAAGTTGCATTAGGGTTTCGGTTAAGCGAAGTAGTGCTGTGTCTGATTTCGTTTTCGGTTATGGCCGCGGACAAAACTCGTGGTTGGAGCGGTGATTCTTTTGATCGCTACAAGGAATACAGGTATTGTTTGTCTGTGAATGTAATCGCATTTGTATACGCTGCGTTTCAAGCGTGTGATCTGGCGTATCAGGTAGTAACGGGAAGACGCATAATCAATCACCACCTGCGTTACCACTTTGATTTCTTCATGGATCAGGTTTTGGCGTATCTTTTGGTATCGGCTGCATCATCTGCTGCTACACGCGTTGATGACTGGCAATCGAATTGGGGAAAAGATGATTTCACAGAGATGGCGAGTGCTTCAATTGCGTTGACCTTTCTTGCTTTTGTTGCCTTTGCTATTAGCTCGTTAATCTCTGGCTACAACCTCTGCACTCTGTTCTCATAG 798 0.5388 MPSMKTSSSKTSESSTQFDSPHSPLRSFPLFDNADPFHSPQNDNSRAIVIVETTSTQFAQAAPPAPESEHRNPPPEAVVTRPVWPETKSSATVGRTRPRPVAPPSSVVPKREMMAKKVALGFRLSEVVLCLISFSVMAADKTRGWSGDSFDRYKEYRYCLSVNVIAFVYAAFQACDLAYQVVTGRRIINHHLRYHFDFFMDQVLAYLLVSAASSAATRVDDWQSNWGKDDFTEMASASIALTFLAFVAFAISSLISGYNLCTLFS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00846 265 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 73 262 - -
Gma17g00846 265 Pfam Casparian strip membrane protein domain 114 248 IPR006702 -
Gma17g00846 265 MobiDBLite consensus disorder prediction 1 23 - -
Gma17g00846 265 MobiDBLite consensus disorder prediction 1 106 - -
Gma17g00846 265 MobiDBLite consensus disorder prediction 37 62 - -
Gma17g00846 265 PANTHER CASP-LIKE PROTEIN 4A3 73 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00846 Gma-Chr17 7171581 7172986 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00846 - - gmx:100785751 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00352 05 3294532 3295957 Gma17g00846 17 7171581 7172986 ECH
Gma17g00846 17 7171581 7172986 Gma17g00846 17 7171581 7172986 ECH
Gma17g00846 17 7171581 7172986 Gma05g00352 05 3294532 3295957 GST
Gma17g00846 17 7171581 7172986 Gma06g01633 06 16141678 16143747 PCT
Gma06g01633 06 16141678 16143747 Gma17g00846 17 7171581 7172986 PCT