Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma06g01633 ATGAACAAATCGCAGTCGAAGAACTCCGAGTCGTCGACTCAGTTCGACTCGCCGCACTGGGACGGCACCGAGTCGCCGGAAAAATCGCCGGAGAAGCGCGACAACTCCGTGGCCATCGTGACCGTTGGCAAGCTCAAGCAGTTCACACCGGAGAAGCGCGCGGAGCACCGGGAACCGCCGGAAAATCCGCCGTCGGCGGCGGTGGTGATGTTCAACGACCAGGCGGCGGAGGAGGATCAGAGGACGGCGGAAAAGGCGGTTCCGGCGGTCGGCGGAGGAGAACGGAGATCAAGGTCGGCGGCGGCGGCGGAGGGGTGGAAGACGGACGAGACGGTGAGCAAGGCGGCGCTGGGGTTCCGGCTGAGCGAGGTGGTGGTGTGTCTGATTTCGTTTTCTGTTATGGCCGCAGATAAGACGCAAGGTTGGAGTGGTGATTCATTTGATCGCTATAAAGAATATAGGTATTGTTTATCTGTGAATATTATTGGATTTGCATACTCTGCATTACAAGCATGTGATTTGACATGCCAACTTGCCACGGGGAAACGCTTAATCAGTCACCACCTTCGCAACCACTTTGATTTCTTCATGGATCAGGTTCTGGCATATCTTCTGATATCGTCATCATCGTCTGCAGCCACACGGGTTGAGGATTGGATATTGAACTGGGGGAAAGACGAGTTCACAGAAATGGCCACTGCTTCAATTGGAATGGCCTTCCTCGCTTTCGTTGCCTTTGCTATCAGCTCACTCATCTCTGGTTACACTCTATGCAACCGAAGCTCCATGTGA 792 0.5442 MNKSQSKNSESSTQFDSPHWDGTESPEKSPEKRDNSVAIVTVGKLKQFTPEKRAEHREPPENPPSAAVVMFNDQAAEEDQRTAEKAVPAVGGGERRSRSAAAAEGWKTDETVSKAALGFRLSEVVVCLISFSVMAADKTQGWSGDSFDRYKEYRYCLSVNIIGFAYSALQACDLTCQLATGKRLISHHLRNHFDFFMDQVLAYLLISSSSSAATRVEDWILNWGKDEFTEMATASIGMAFLAFVAFAISSLISGYTLCNRSSM 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma06g01633 263 PANTHER CASP-LIKE PROTEIN 46 263 - -
Gma06g01633 263 MobiDBLite consensus disorder prediction 1 105 - -
Gma06g01633 263 Pfam Casparian strip membrane protein domain 111 245 IPR006702 -
Gma06g01633 263 MobiDBLite consensus disorder prediction 1 20 - -
Gma06g01633 263 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 46 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma06g01633 Gma-Chr6 16141678 16143747 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma06g01633 - - gmx:100808291 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma06g01633 06 16141678 16143747 Gma04g01765 04 47195159 47197776 ECH
Gma06g01633 06 16141678 16143747 Gma06g01633 06 16141678 16143747 ECH
Gma17g00846 17 7171581 7172986 Gma06g01633 06 16141678 16143747 PCT
Gma05g00352 05 3294532 3295957 Gma06g01633 06 16141678 16143747 PCT
Gma06g01633 06 16141678 16143747 Gma17g00846 17 7171581 7172986 PCT
Gma06g01633 06 16141678 16143747 Gma05g00352 05 3294532 3295957 PCT