Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00843 ATGGCCACCCAATCACCGCCTCCTCCCACTCCCACCGCCACCGACCAAAACCAAGgttctgaagtcgtgcaagcaacaactgtagatcagcaaaatgccagagaagagcctgctaaacagagttcaactacatcagtctttgtgaactcgcaactgatgcgagaagaacaaattcagaatgctgtgaaatttctatcacacccaaaagttataggttcacctgtcatgtataggcgatcatttctagagaagaagggccttacgaaggaggagattgatgaagcttttcagcgtgtgccagattcagctccaacagtgcagacaggtggtgtaaatcaagatggccaattgaaatcgtcatcaaacattcagcaacaagcccaacatcaaactttgcagccgggtttacctgcttctactggtgttaatacttcgccgggaaccttatcacgctccaaatttcactggtctcatacacttattgcagttggattactggctgcttcaggtgctggaacagctataataattaagaattctgttctccctcggttaaaatcttggatacgtaaggttgtcttagacaatgatgatgaacaattaaagaaaactgacaacaaaccgacactgatggaagaagctgcgcaagctgcaaaatcagctgcagctgcagctgcagatgtggcaaaagcaagccaagaaatgctggcttcaaaaggtgaagagaggagatactttgtggaagttgtgagccttttagataaacaagtacaagaaatgaagtcaatgacaaatgccataagaaggttggaagggcaagaagaTCTTCAAATCAGTCAAACAAGTTCGAAGCAACTGATTGTGAATGGAAAAGCAGACTACGACTTGCATTCAGTGAGATTTTCATCCCCACCTACATCTGTTGAACCATCAAGTGGTCTTCATCCAAAGGCATATGCGGAGATAATGGCCATGGTCCAAAGAGGAGAGAAGTCTTCTAATATTAGGCCTTGGGAGGTTAGTCAGGTGCAAAGCACGTCTACCCAGATGCTTCAGTCTCAAGTAAATGGTGAAGACTTGAATACTAAGGCCCAGGATACCCCTCTAGTAAATGGGGATGACTCATTACCCTGGTGGCAGAGGAAAAATGTCAGAATCAGAGAGATTGATAATGAAAATGAGTCTAATGGAGTACCTTATGCTTCTGCATCCAATCAGCAGCCAGTCCAACGCGTATGGGTTCCTCCTCAACCTCCCCCCATAGCTATGCCGGAGGCTGCAGAAGCAATCAGACGACCAAAACCAGCGGCCCAAAAGGAACAGGTGTCTGATAATCAGTCAGTAGCTCATTCTTTAGACAGCTCTGATGACGTACATATGGCCCCAAAACTATTGGAATCCGAAGGTGCAGTAGAGGGCAGCAGTGTCAGCTCGGTTCCCACCTCTAGTGAGATACAAGAGGAGCATGAAGTCAAATATGATGAGAAATGA 1491 0.2294 MATQSPPPPTPTATDQNQGSEVVQATTVDQQNAREEPAKQSSTTSVFVNSQLMREEQIQNAVKFLSHPKVIGSPVMYRRSFLEKKGLTKEEIDEAFQRVPDSAPTVQTGGVNQDGQLKSSSNIQQQAQHQTLQPGLPASTGVNTSPGTLSRSKFHWSHTLIAVGLLAASGAGTAIIIKNSVLPRLKSWIRKVVLDNDDEQLKKTDNKPTLMEEAAQAAKSAAAAAADVAKASQEMLASKGEERRYFVEVVSLLDKQVQEMKSMTNAIRRLEGQEDLQISQTSSKQLIVNGKADYDLHSVRFSSPPTSVEPSSGLHPKAYAEIMAMVQRGEKSSNIRPWEVSQVQSTSTQMLQSQVNGEDLNTKAQDTPLVNGDDSLPWWQRKNVRIREIDNENESNGVPYASASNQQPVQRVWVPPQPPPIAMPEAAEAIRRPKPAAQKEQVSDNQSVAHSLDSSDDVHMAPKLLESEGAVEGSSVSSVPTSSEIQEEHEVKYDEK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00843 496 MobiDBLite consensus disorder prediction 14 45 - -
Gma17g00843 496 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 336 484 - -
Gma17g00843 496 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE 10 336 - -
Gma17g00843 496 Pfam Pex14 N-terminal domain 54 98 IPR006785 -
Gma17g00843 496 MobiDBLite consensus disorder prediction 439 453 - -
Gma17g00843 496 Gene3D - 42 106 IPR036388 -
Gma17g00843 496 Coils Coil 253 273 - -
Gma17g00843 496 MobiDBLite consensus disorder prediction 101 123 - -
Gma17g00843 496 MobiDBLite consensus disorder prediction 431 496 - -
Gma17g00843 496 MobiDBLite consensus disorder prediction 1 45 - -
Gma17g00843 496 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 336 484 IPR025655 GO:0005515|GO:0005778|GO:0016560
Gma17g00843 496 PANTHER PEROXISOMAL MEMBRANE PROTEIN PEX14 10 336 IPR025655 GO:0005515|GO:0005778|GO:0016560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00843 Gma-Chr17 7137819 7144025 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00843 K13343 - gmx:100784152 889.412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00843 17 7137819 7144025 Gma05g00355 05 3322661 3329787 GST
Gma17g00843 17 7137819 7144025 Gma06g01629 06 16036589 16041784 PCT
Gma06g01629 06 16036589 16041784 Gma17g00843 17 7137819 7144025 PCT