LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma06g01629	ATGGCTACTCAATCCCCTTCACCTCAGAACCTAGgtggtgaaattgagcaaacagaaaatgtagatcagcataataggggagaagagcttggtaaacagagttcagacacatcggtgtttgtgaactcagagccattgcgtgaggaacaaattcagaatgctgtgaaatttctgtcgcacccgaaagttagaggttctcctgtcatccacagacgatcgtttctggagaagaagggccttacgaaggaggagattgatgaagcctttcggcgtgtgcctgattcacctccaagtgtgcagacagctggcataaatcaagatggacaattgaagccatcatcaaacattcagcagcaaggccaaccacaggctttgcagctgactgtaccagcttctactggtgttactactacgcttggaaccttatctcgccgcagttttcactggtcacatgcccttattgcagttggattactggctgcttcaggtgctggtacagttatagtaattaagaattctattctccctcggttaaaatcctggatacgcaatgttgtcctagaagaggatcatgaccaatcaaagagaacaggctcaaaaccaacattggcagaagaagctgcacaggctgcaaaagcagctgcagttgcagctgctgatattgcaaaagcaagccaagaattactgagttcaaaaattgaagagaagagatattttgtagaagttgtgaaccttttggataagcaagtgcaggaaatgaagttgatgactaatgcaataggaagattggaagcttctggtggactctctgtctcaaagcaagaagaccgcttagtcacTCAAACAGGTTCAAAGACACAGCAACTGATCGTGAATGGGAAGTCAGACTATGAGTCCCGATCAGTGAGATCTTCATCCCCTCCTGTATCTGTTGAACCATCTAGTGCTCCTCATCCTAAATCATATATGGAGATAATGGCCATGATCCAAAGAGGGGAGAAGCCTTCTAACATTAGGGAAATTGATGATTCAGCCCCCAACCCTTATCAGCAACCATCAAATCCTCGCTTAGCACCTAGAGCCAAGCCTTGGGAGGTTAGTCAGGTGCAAAACACCTCAACCCAAGTCCTTCCGTATCAAGTAAATGGCAAGATCCAAGATAATGGTGACAACACAGTACCCTGGTGGCAAACAAAGAACGTCAGAATCAAAGAGATCGATAATGAAATTGAGTATAATGGAGCACCTGCTGCATCCAGTCCGCAGCCAGTCCAACGAGCGTGGGTTCCTCCTCAGCCTCCTCCTATAGCAATGCCAGAGGCTGCAGAAGCGATCAGACGCCCAAAGCAGGTAGTCCAAAAGGAAGTGACACTGGATGATCAGTCAGCAGCTCATTCTTCAGACCTCACTAATGGATCCAAATCCGAAGATGCAATAGAAGGCAACGTTGTCAACTCACTTGTCAGCTCTGGTGAGATCCAAAACCATGAAGTTGGTTACGAAGAGAAATGA	1512	0.2196	MATQSPSPQNLGGEIEQTENVDQHNRGEELGKQSSDTSVFVNSEPLREEQIQNAVKFLSHPKVRGSPVIHRRSFLEKKGLTKEEIDEAFRRVPDSPPSVQTAGINQDGQLKPSSNIQQQGQPQALQLTVPASTGVTTTLGTLSRRSFHWSHALIAVGLLAASGAGTVIVIKNSILPRLKSWIRNVVLEEDHDQSKRTGSKPTLAEEAAQAAKAAAVAAADIAKASQELLSSKIEEKRYFVEVVNLLDKQVQEMKLMTNAIGRLEASGGLSVSKQEDRLVTQTGSKTQQLIVNGKSDYESRSVRSSSPPVSVEPSSAPHPKSYMEIMAMIQRGEKPSNIREIDDSAPNPYQQPSNPRLAPRAKPWEVSQVQNTSTQVLPYQVNGKIQDNGDNTVPWWQTKNVRIKEIDNEIEYNGAPAASSPQPVQRAWVPPQPPPIAMPEAAEAIRRPKQVVQKEVTLDDQSAAHSSDLTNGSKSEDAIEGNVVNSLVSSGEIQNHEVGYEEK	503

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma06g01629	503	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14	16	471	IPR025655	GO:0005515\|GO:0005778\|GO:0016560
	Gma06g01629	503	PANTHER	PEROXISOMAL MEMBRANE PROTEIN PEX14-LIKE	16	471	-	-
	Gma06g01629	503	Pfam	Family of unknown function (DUF5572)	317	366	-	-
	Gma06g01629	503	Gene3D	-	39	101	IPR036388	-
	Gma06g01629	503	Pfam	Pex14 N-terminal domain	47	91	IPR006785	-
	Gma06g01629	503	MobiDBLite	consensus disorder prediction	1	18	-	-
	Gma06g01629	503	MobiDBLite	consensus disorder prediction	292	311	-	-
	Gma06g01629	503	MobiDBLite	consensus disorder prediction	338	361	-	-
	Gma06g01629	503	MobiDBLite	consensus disorder prediction	92	122	-	-
	Gma06g01629	503	MobiDBLite	consensus disorder prediction	1	44	-	-
	Gma06g01629	503	MobiDBLite	consensus disorder prediction	292	318	-	-
	Gma06g01629	503	MobiDBLite	consensus disorder prediction	455	493	-	-
	Gma06g01629	503	MobiDBLite	consensus disorder prediction	452	503	-	-
	Gma06g01629	503	MobiDBLite	consensus disorder prediction	98	122	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma06g01629	Gma-Chr6	16036589	16041784	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma06g01629	K13343		-	gmx:100807229	883.634

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gma17g00843	17	7137819	7144025	Gma06g01629	06	16036589	16041784	PCT
	Gma05g00355	05	3322661	3329787	Gma06g01629	06	16036589	16041784	PCT
	Gma06g01629	06	16036589	16041784	Gma17g00843	17	7137819	7144025	PCT
	Gma06g01629	06	16036589	16041784	Gma05g00355	05	3322661	3329787	PCT