Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00828 ATGGAGAACACTAGCAACGACGCTGGCGTCGAAGCCCTACGGCTGCTGAAAGCGACGGAACCGCCTTCATTTCTCACTCCGAACCCAGCGCTGTCGGAAGCTGCTCGTACCGCATCGCAATACTTGTTCTCTTCCCTAAAACCGTTTTCCCCAAAATCGCCACTGGACCAACTCCTTGTGGACGGTTTCGACGCAGAACAGATATGGCAGCAAATAGACCTCCAAACGCAGCCTCTGTTATCCACCATTCGCCGCCGCGTGAAACAGCTGGTCGAAAATCCCGAAGAGATTTCCCAGCTGAAGGTTCCTTCGGAGGGTGGGAACAAGAAGGAGGAGAAGAGTCAAGACGAGTGGGAAGAAGAGAGTGACGGTTTTGACGAGGAATTGGATGAGgaagaggaagaagatgaggatgatgaagtaaaggagggagaaggagaagaagaagaagaagagacggaggatgaagaggaagagggggaggataatgaagaagGTGGTGTCATTGAGGATAAATTCTTTAAAATAGATGAATTGACAAAGTACTTAGAGAAGGAGGAAGATGATTTCGAGAATGGCGAGGCAGACAGAGAAGGTGAGGAGGAAGATGACGAAGAAGAAAGTGATGAGGAAGGTGATTTTGGGATTGGTGATGATGATGATGAGGATGAAGATGAAGAAGCAGAGGGCATAGAAAGTGCAAGGTATGAAGACTTCTTTGGAGGTAAAAAGGAAAGGGGGTCAAAAAGAAAAGCTCAAGTACTTCAGGAATCTGAATATTCTGATGATGAAGATGATATGGAATTTGACAAGCAGACGAAAGGGACTGCATCTGCCCATGAAAAGCAACTGGAAAAAATTCAGTCCAAGATAGAGCTGATGGAGAAAGCTAACATAGATCCAAAAACATGGACTATGCAGGGTGAGGTAACTGCTGCAAAGAGACCAAAGAATAGTGCATTGGAAGTTGATCTGGACTTTGAGCATAATGTGAGGCCTGCTCCTGTAATCACTGAAGAAGTTACAGCTTCAATTGAGGATATAATCAAGAAAAGGATTATTGAGGGGCACTTTAATGATGTTCAAAGGGTTCCTAAATTGCCATCTAAAGCACCTCGGGAAGTTAAAGAGTTGGATGACAATAAAAGCAAGCAGGGTCTTGCAGAACTTTATGAGCAAGAATATGTTCAGAAGACAGACCCCACTTCTGCTCCATTGTCATTTAAAGATGAACAAAAGAATGAGGCAAGCATGCTGTTTAAGAGACTCTGTCTGAAGCTGGATGCCCTTTCTCATTTTAACTTTGCTCCAAAACCTGTTATAGAGGACATGTCTATTCAAGCTAATGTGCCTGCTCTAGCAATGGAAGAAATTGCACCTGTGGCTGTTTCAGATGCTGCTATGTTGGCACCTGAGGAGGTATTTGATGGGAAAGGTGATATTAAGGAAGAAACAGAGCTTACAAAGGCAGAAAGGAAAACAAGGAGAGCTAATAAGAAAAGAAAATTTAAAGCTGAGGCAGTAAAAAGGACGAATAAGAAGGCACAAGAAGGGGTGATTCGTAGCAAAGTTAATGGGTAA 1581 0.4105 MENTSNDAGVEALRLLKATEPPSFLTPNPALSEAARTASQYLFSSLKPFSPKSPLDQLLVDGFDAEQIWQQIDLQTQPLLSTIRRRVKQLVENPEEISQLKVPSEGGNKKEEKSQDEWEEESDGFDEELDEEEEEDEDDEVKEGEGEEEEEETEDEEEEGEDNEEGGVIEDKFFKIDELTKYLEKEEDDFENGEADREGEEEDDEEESDEEGDFGIGDDDDEDEDEEAEGIESARYEDFFGGKKERGSKRKAQVLQESEYSDDEDDMEFDKQTKGTASAHEKQLEKIQSKIELMEKANIDPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDIIKKRIIEGHFNDVQRVPKLPSKAPREVKELDDNKSKQGLAELYEQEYVQKTDPTSAPLSFKDEQKNEASMLFKRLCLKLDALSHFNFAPKPVIEDMSIQANVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDIKEETELTKAERKTRRANKKRKFKAEAVKRTNKKAQEGVIRSKVNG 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00828 526 MobiDBLite consensus disorder prediction 189 232 - -
Gma17g00828 526 MobiDBLite consensus disorder prediction 494 508 - -
Gma17g00828 526 MobiDBLite consensus disorder prediction 117 166 - -
Gma17g00828 526 MobiDBLite consensus disorder prediction 233 258 - -
Gma17g00828 526 MobiDBLite consensus disorder prediction 167 188 - -
Gma17g00828 526 Coils Coil 115 135 - -
Gma17g00828 526 MobiDBLite consensus disorder prediction 267 283 - -
Gma17g00828 526 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 3 516 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Gma17g00828 526 PIRSF snoRNP_Mpp10 3 275 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Gma17g00828 526 PIRSF snoRNP_Mpp10 218 525 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Gma17g00828 526 Coils Coil 176 203 - -
Gma17g00828 526 Coils Coil 277 297 - -
Gma17g00828 526 Pfam Mpp10 protein 23 509 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Gma17g00828 526 MobiDBLite consensus disorder prediction 97 283 - -
Gma17g00828 526 MobiDBLite consensus disorder prediction 486 526 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00828 Gma-Chr17 6992363 6997387 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00828 K14559 - gmx:100781093 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00828 17 6992363 6997387 Gma17g00828 17 6992363 6997387 ECH
Gma17g00828 17 6992363 6997387 Gma05g00368 05 3454278 3460592 GST