Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00368 ATGGCGAACACTAGCGATGCTGGCGTCGAGGCCCTACGGCGGCTGAAAGCGACCGAACCACCGTTGTTCCTCGCTCCCAACCCGGCGCTGTCGGAAGCTGCTCGTACTGCGTCGCAATACTTGTTCTCTTCCCTGAATCCATTTTCCCCAAAATCGCCACTGGACCAACTCCTCGTGGACGGTTTCGACGCCGAACAGATATGGCAACAAATCGACCTCCAAACGCAGCCTCTATTATCCACCCTTCGCCGCCGCGTGAAGCAGCTGGTCGAAAATCCCGAAGAGATTTCCCAGCTGAAGGTTCCTTCGGAGGGTGGGAATAAGAAGGAGGAAAATATTCTAGACGAGTGGGAAGAAGAGAGTGACGGTTTTGACGAGGAATTGgatgaggaagaggaagaagatgaggaggatgaagaaaaggagggagaaggagaagaagatgaagaagaagaagaagaagaagagatggaggatgaagaggaagaagaagagaatgaggaagGTGGTGGCATTGAAGATAAATTCTTGAAAATAGATGAATTGACAAAGTACTTAGAGAAGGAGGAAGAGGATTTCGAGAATGGCGAGGCAGACAGAGAAGGTGAGGAGGAAGACGATGACGAAGGGGAAAGTGATGAGGAAGGTGATTTTGGGATTGGTGATGATGATGATGAAGATGAAGATGAAGAAACAGAGGGCATAGAAAATGCAAGGTATGAAGACTTCTTTGGAGGTAAAAAGGAAAGGGGGTCAAAAAGAAAAGCTCAAGCACTtcaggaatctgattattctgatgaagatgacatggaattggacaagcagacgaaaggGACTGCATCTGCCCATGAAAAGCAACTGGAAAAGATTCAGTCCAAGATAGAGCAGATGGAGAAAGCTAACATAGAGCAAAAAGCATGGACTATGCAGGGTGAGGTAACTGCTGCAAAGAGACCCAAGAATAGTGCATTGGAGGTTGATCTGGACTTTGAGCACAATGTGAGGCCTGCTCCTGTAATCACTGAAGAAGTTACAGCTTCAATTGAGGATATAATCAAGAAAAGGATTATTGAGGGGCATTTTAATGATGTTCAAAGGGTTCCTAAATTGCCACCTAAAGGGCCTCGGGAAGTTAAAGAGTTGGATGATAATAAAAGCAAGCAGGGTCTTGCAGAAATTTACGAGCAAGAATATGTTCAGAAGACAGATCCCACTTCTGCTCCGTTGTTATTCAAAGATGAACAAAAGAATGAGGCAAGCATGCTGTTTAAGAGACTCTGTCTGAAGCTGGATGCCCTTTCTCATTTTAACTTTGCTCCAAAACCTGTTATAGAGGACATGTCTATTCAAGCTAATGTGCCTGCTTTGGCAATGGAAGAAATTGCACCTGTGGCTGTTTCAGATGCTGCTATGTTGGCTCCTGAGGAGGTATTTGATGGCAAGGGTGATATTAAGGAAGAAACAGAACTTACAAAGGCAGAAAGGAAAAGAAGGAGAGCTAATAAGAAAAGAAAATTTAAAGCTGTGGCAGTAAAAAGGACGAATAAGAAGGCACAAGAAGGTGCAATTCGTAGACAAGTTAATGGGTAA 1590 0.3994 MANTSDAGVEALRRLKATEPPLFLAPNPALSEAARTASQYLFSSLNPFSPKSPLDQLLVDGFDAEQIWQQIDLQTQPLLSTLRRRVKQLVENPEEISQLKVPSEGGNKKEENILDEWEEESDGFDEELDEEEEEDEEDEEKEGEGEEDEEEEEEEEMEDEEEEEENEEGGGIEDKFLKIDELTKYLEKEEEDFENGEADREGEEEDDDEGESDEEGDFGIGDDDDEDEDEETEGIENARYEDFFGGKKERGSKRKAQALQESDYSDEDDMELDKQTKGTASAHEKQLEKIQSKIEQMEKANIEQKAWTMQGEVTAAKRPKNSALEVDLDFEHNVRPAPVITEEVTASIEDIIKKRIIEGHFNDVQRVPKLPPKGPREVKELDDNKSKQGLAEIYEQEYVQKTDPTSAPLLFKDEQKNEASMLFKRLCLKLDALSHFNFAPKPVIEDMSIQANVPALAMEEIAPVAVSDAAMLAPEEVFDGKGDIKEETELTKAERKRRRANKKRKFKAVAVKRTNKKAQEGAIRRQVNG 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00368 529 MobiDBLite consensus disorder prediction 171 191 - -
Gma05g00368 529 MobiDBLite consensus disorder prediction 115 170 - -
Gma05g00368 529 MobiDBLite consensus disorder prediction 489 529 - -
Gma05g00368 529 Coils Coil 280 303 - -
Gma05g00368 529 MobiDBLite consensus disorder prediction 237 262 - -
Gma05g00368 529 PANTHER U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 3 520 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Gma05g00368 529 MobiDBLite consensus disorder prediction 192 236 - -
Gma05g00368 529 Pfam Mpp10 protein 49 508 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Gma05g00368 529 Coils Coil 179 206 - -
Gma05g00368 529 MobiDBLite consensus disorder prediction 97 287 - -
Gma05g00368 529 PIRSF snoRNP_Mpp10 220 528 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Gma05g00368 529 PIRSF snoRNP_Mpp10 1 276 IPR012173 GO:0005634|GO:0005732|GO:0006364|GO:0034457
Gma05g00368 529 MobiDBLite consensus disorder prediction 496 512 - -
Gma05g00368 529 MobiDBLite consensus disorder prediction 270 287 - -
Gma05g00368 529 Coils Coil 107 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00368 Gma-Chr5 3454278 3460592 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00368 K14559 - gmx:100817724 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00368 05 3454278 3460592 Gma05g00368 05 3454278 3460592 ECH
Gma17g00828 17 6992363 6997387 Gma05g00368 05 3454278 3460592 GST