Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00806 ATGATGGGTAACCCTAACCCTGCCCCGGAAGAAGAAAAGAGTCTCCGGGACGAGCTGCTGGGTCCCATCCTGCTCGGAGAGCGCGTGATAAAACTGGCTCAGGAGGCGGAGTCGCCGAAGGTGGACTGCACGGAGCTGGCGCGTAAGGTGCAGGTGGTCTGCGATAACCTCCGCTCCGTGGTGCGCGTGGTGTCTGGAACCCAGTGCGTCAACGAGCGCCCAATCCGCCGCATCGTCGGCGAGGTCTCGAAAAACATAGAGCGCACGTTAGCCCTCATCCGCAAGTGCAAGAAGCACGGTGGCGTCCTCCGCCAGGTCTTCTCCATGACCACCACCGCCGACTTCCGCAAAGTCCGGAGCCTTCTTGAATCTTCCAACGGCGACCTGGTGTGGCTCCTCACCATCTTGGACTCCAAAGACGGCACCAATGTCTCACTCCCCCCTATCGCCAGCAACGACCCTATTCTCGCTTGGGTCTGGACCTTCACCTACACTCTCCAATTGGGCCAGCCCAAGGACCGCGCAGAAGCCGCCACTGAACTCGGTTCTCTCGCCAGAGACAACGACCGTACAAAATTTATCATATTGGATGAAGGTGGGGTGATGCCCCTCCTCAAGCTTCTTAAAGAAGCTTCTTCCCCTGCTGCTCAGGTCGCTGCTGCCAATGCTCTTGTTAACATCACAACCAATCAAGACAGGGTTGTTACTTTCATTGTGGAGTCCCATGCTGTCCCCATCATTGTTCAGGTTCTCGGTGATTCCCCTATGAGGGTTCGTGTCTCTGTTGCCAATTTGGTCTCTGCTATGGCCGAGCAACATGAACTTGCTCGCGAGGAGTTCGTCAGGGCCAATGTCGCTAGGCCCCTTGTGTCCTTGTTGTCCATGGATATGGGTACTGTCCTCACTGACCCCGTGGCCGACCGCGCCACCAGCATTCACTCGCTTGTTCTCAATTTATCCAATGTTGGGGAGGCGAATTCAGATGGGAGTAGCCGCGGCTCCGGCCAGCATCGAAGAGATAGAGAGGTCGAGAGCCCCGAGTTGAGGAATGAGGTCAAAGTCAGTTGTGCTAAGGCTCTTTGGAAACTCTCCAATGGATGTCTCTCAAGTTGCAGGAAGATTACCGAGACTAAAGGTTTGCTTTGTCTTGCCAAGATTATTGAGTCCGAGAGTGGGGAGTTGCAGCTTAATTGTCTTATGGCTGTCATGGAGATTGCTGCCGTGGCGGAGTCCAATGCTGATCTTAGAAGAGCTGCTTTTAAGCGAACTGCGCCGGCGGCAAAGGCGGTTTTGGATCAGCTTTTGCGGGTGGTTCAGGAGGAGAGCGACCCGGCATTGCGGATTCCTGCTATTAAGGCAATTGGTTCCTTGGCCAGAAACTTCTCTGGGAAGGTTCCGCAGGTTATTGGTCCTTTAGTTGCTCAGCTTGGTAACAGAGATGTTGATGTGGCCAGTGAGGCTGCTATTGCTTTGGGGAAGTTTGTGTGCCCGGACAACTACAACTGTGTTGACCATTCTAAGGCAATACTTGAGCTTGATGGGATTCCTAAGCTAATGAGCCTGCTGCAGATAAATGATCGCCAACAAGTTCATGGCCTGAAATTACTTTGTTACCTTGCCTTAAATGTTGGTAACAGTAGGGTCCTTGAGCAAGAACGTGCCTTGAATACCCTAGAGAGATTTGCTCGTCCTGTTCAAGCACAACATCCTGATTTGAAGGACCTTTTTGCAAAGGCCTTACACCACCTCACTCTTTATCAGCCAGGAGCTCAATTGCACCGACAGCCCTTGGGGCTGTAA 1800 0.5322 MMGNPNPAPEEEKSLRDELLGPILLGERVIKLAQEAESPKVDCTELARKVQVVCDNLRSVVRVVSGTQCVNERPIRRIVGEVSKNIERTLALIRKCKKHGGVLRQVFSMTTTADFRKVRSLLESSNGDLVWLLTILDSKDGTNVSLPPIASNDPILAWVWTFTYTLQLGQPKDRAEAATELGSLARDNDRTKFIILDEGGVMPLLKLLKEASSPAAQVAAANALVNITTNQDRVVTFIVESHAVPIIVQVLGDSPMRVRVSVANLVSAMAEQHELAREEFVRANVARPLVSLLSMDMGTVLTDPVADRATSIHSLVLNLSNVGEANSDGSSRGSGQHRRDREVESPELRNEVKVSCAKALWKLSNGCLSSCRKITETKGLLCLAKIIESESGELQLNCLMAVMEIAAVAESNADLRRAAFKRTAPAAKAVLDQLLRVVQEESDPALRIPAIKAIGSLARNFSGKVPQVIGPLVAQLGNRDVDVASEAAIALGKFVCPDNYNCVDHSKAILELDGIPKLMSLLQINDRQQVHGLKLLCYLALNVGNSRVLEQERALNTLERFARPVQAQHPDLKDLFAKALHHLTLYQPGAQLHRQPLGL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00806 599 MobiDBLite consensus disorder prediction 326 346 - -
Gma17g00806 599 Gene3D - 18 135 IPR036537 GO:0007166
Gma17g00806 599 Gene3D - 334 595 IPR011989 -
Gma17g00806 599 SMART arm_5 230 271 IPR000225 GO:0005515
Gma17g00806 599 SMART arm_5 502 541 IPR000225 GO:0005515
Gma17g00806 599 SMART arm_5 187 229 IPR000225 GO:0005515
Gma17g00806 599 PANTHER ARMADILLO REPEAT ONLY 4 10 597 - -
Gma17g00806 599 SUPERFAMILY ARM repeat 170 584 IPR016024 -
Gma17g00806 599 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 10 597 - -
Gma17g00806 599 Gene3D - 162 328 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00806 Gma-Chr17 6742515 6744836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00806 - - gmx:100817625 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00806 17 6742515 6744836 Gma17g00806 17 6742515 6744836 ECH
Gma17g00806 17 6742515 6744836 Gma05g00390 05 3687107 3691016 GST
Gma17g00806 17 6742515 6744836 Gma06g01592 06 15474220 15480526 PCT
Gma06g01592 06 15474220 15480526 Gma17g00806 17 6742515 6744836 PCT