Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00390 ATGATGGGTAACCCAAACCCTAACCCTACCCCTACCCCGGAAGAGGAAAAGAGCCTCAAGGAGGAGCTGCTGGATCCCATCCTGCTCGGAGAGCGTGTGATAAAGCTTGCTCAGGAGGCGGAGTCGTCTAAGGTGGACTGCACGGAGCTGGCGCGTAAGGTGCAGGTGGTCTGTGACAACCTCCGCTCCGTGGTGCGCGTTGTGTCGGGGGCTCAGTGCCTCAACGAGCGCCCCATCCGCCGCATCGTCGGCGAGGTCTTCAAAAACCTAGAGCGCACGTTAGCGTTCATCCGCAAGTGCAAGAAGCACGGCGGCGTCCTCCGCCAGGTCTTCTCCATGACCACCACCGCCGATTTCCGCAAAGTCTGGAGCCTTCTCGAATCTTCCAACGGCGACCTGGTCTGGCTCCTCACCATCTTGGACTCCAAAGACGGCACCAATGTCTCACTTCCCCCTATTGCCAGCAACGACCCTATTCTCGCTTGGGTCTGGACCTTCACCTACACTCTCCAATTGGGCCAGCCCAAGGACCGCGCCGAAGCCGCCACCGAACTCGGTTCACTCGCCAGAGACAACGACCGTACAAAATTTATCATCTTGGAGGAAGGTGGGGTGATGCCCCTCCTTAAGCTTCTCAAGGAAGCTTCTTTCCCCGATGCTCAGATCGCAGCTGCCAATGCTCTTGTTAACATTACAACCAATCAAGACAGGATTGTTGGTTTCATTGTGGAGTCCCATGCTGTCCCCACCATTGTTCAGGTTCTCGGTGATTCCCCTATGAGGGTTCGTGTCTCTGTTGCCAATTTGGTCTCTACTATGGCTGAGCAACATGAGCTTGTTCGCGAGGAGTTCATCAGGGCCAATGTGACTAGGCCCCTTGTGTCCTTGTTGTCCATGGATATGGGTACTGTCCTTGCTGACCCCATGGCCGGTCGCGCCAGCATTCATTCGCTTGTTCTCAATTTGTCCAATGTCGGGGAGGCGAATTCGGATGGGAGTAGCCGCGGCTCCAGCCACCAGCGAAGAGATAGAGAGGTTGAAAGCCCGGAGTTGAGGAATGAGGTCAAAATCAGTTGTGCTAAGGCTCTTTGGAAACTCTCCAAAGGGTGTCTTTCAAGTTGCAGGAAGATTACCGAGACTAAAGGTTTGCTTTGTCTTGCTAAGATTATTGAGTCCGAGAGTGGGGAATTGCAGCTCAATTGTCTTATGGCTGTCATGGAGATTGCTGCTGTGGCAGAGTCGAATGCTGATCTTAGAAGAGCTGCTTTTAAGCGAACTGCACCGGCAGCCAAGGCAGTTTTGGATCAACTTTTGAGGGTGGTTCAGGAGGAGAGTGATCCGGCATTGCGGATTCCTGCTATAAAGGCAATTGGTTCCTTGGCCAGAAACTTCTCTGGGAAGGTTCCACAGGTTATTGGTCCTTTAGTTGCTCAGCTTGGTAACAGAGATGTTGATGTGGCTAGTGAGGCTGCCATTGCTTTGGGGAAGTTTGTGTGCCCAGACAACTACAACTGCATTGACCATTCTAAGGCAATACTTGAGCTTGATGGGATCCCTAAGCTAATGAGCCTGCTGCAGATAAATGATCGCCAACAAGTTCATGGCCTTAAATTACTTTGTTACCTTGCCTTAAATGTAGGTAACAGTAAGGTCCTTGAGCAAGAACGTGCTTTGAATACCCTAGAGAGGTTTGCTCGTCCTGTTCAAGCACAACATCCTGATATGAAGGACCTTTTTGCAAAGGCCATACACCACCTCACTCTTTATCAGCCTGGAGCTCAATTGCACAGACAGCCCTTGGGGCTGTAA 1809 0.5202 MMGNPNPNPTPTPEEEKSLKEELLDPILLGERVIKLAQEAESSKVDCTELARKVQVVCDNLRSVVRVVSGAQCLNERPIRRIVGEVFKNLERTLAFIRKCKKHGGVLRQVFSMTTTADFRKVWSLLESSNGDLVWLLTILDSKDGTNVSLPPIASNDPILAWVWTFTYTLQLGQPKDRAEAATELGSLARDNDRTKFIILEEGGVMPLLKLLKEASFPDAQIAAANALVNITTNQDRIVGFIVESHAVPTIVQVLGDSPMRVRVSVANLVSTMAEQHELVREEFIRANVTRPLVSLLSMDMGTVLADPMAGRASIHSLVLNLSNVGEANSDGSSRGSSHQRRDREVESPELRNEVKISCAKALWKLSKGCLSSCRKITETKGLLCLAKIIESESGELQLNCLMAVMEIAAVAESNADLRRAAFKRTAPAAKAVLDQLLRVVQEESDPALRIPAIKAIGSLARNFSGKVPQVIGPLVAQLGNRDVDVASEAAIALGKFVCPDNYNCIDHSKAILELDGIPKLMSLLQINDRQQVHGLKLLCYLALNVGNSKVLEQERALNTLERFARPVQAQHPDMKDLFAKAIHHLTLYQPGAQLHRQPLGL 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00390 602 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 203 236 IPR000225 GO:0005515
Gma05g00390 602 Gene3D - 22 139 IPR036537 GO:0007166
Gma05g00390 602 Gene3D - 169 327 IPR011989 -
Gma05g00390 602 SUPERFAMILY ARM repeat 174 583 IPR016024 -
Gma05g00390 602 PANTHER ARMADILLO REPEAT ONLY 4 14 600 - -
Gma05g00390 602 MobiDBLite consensus disorder prediction 328 349 - -
Gma05g00390 602 PANTHER ARMADILLO REPEAT ONLY 1 PROTEIN 14 600 - -
Gma05g00390 602 Gene3D - 335 597 IPR011989 -
Gma05g00390 602 SMART arm_5 234 275 IPR000225 GO:0005515
Gma05g00390 602 SMART arm_5 191 233 IPR000225 GO:0005515
Gma05g00390 602 SMART arm_5 505 544 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00390 Gma-Chr5 3687107 3691016 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00390 - - gmx:100813824 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00390 05 3687107 3691016 Gma05g00390 05 3687107 3691016 ECH
Gma17g00806 17 6742515 6744836 Gma05g00390 05 3687107 3691016 GST
Gma05g00390 05 3687107 3691016 Gma06g01592 06 15474220 15480526 PCT
Gma06g01592 06 15474220 15480526 Gma05g00390 05 3687107 3691016 PCT