Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00801 ATGGCATGCAGCACCACTTTACATGCTTCTATTCTAAAACTTCTCATCATTTTCTTATTCGCTGGTTGGGTTTCTCTTTGGCTTCTGAAGCCAACCCAAATATGGACAAGAAAATGGAAACAGGCAGAAGATAGCGCCAATGATACAATTTTTGGATACTATGGTCTTAGCTTTGCTGTGTACGCGTTTCCTATAATTGCTATTGCTATAATTGGACTTCTTTTATTGGATTTGAAAGCTGGATATCAAAGAAGCAGAAGCGCAAGGAGTACTCCATCAAAATCAAACTTCTTCTCAAATCCACTGGTGGTGAATACTACACTGGGAATCTTATCTAGTATTGAAATACTGATAGCTTTCCTTTTCATTGTCTTCTTAGCATGGACCTACTACTCTCGTATTTATACAGACTTCAAAAAGTTGATGCCATACAAATCACTGAAGTTGAATACGTGGCAACTCAAGTATCACAGAATAGCAACCCGGTTCGGGTTGCTAGCAGAAGCTTGCATGGCTTTGTTGCTTCTTCCTATTCTAAGGGGGTTGGCCGTGTTTCGCATACTTGGCATTCAATTTGAAGCTTCAGTTAGATACCACACATGGATTGGAACTGCAATGATACTTTTTGCTACAATACATGGCGCAAGCACTTTGTTGGTCTGGGGGGTCAGCCACCATATTGAGGATGAGATTTGGAAGTGGCAAAAGACTGGACGCATATACCTCGCTGGGGAGATTGCACTTGTTGTTGGGCTAGTCATTTGGGTCACTTCACTTCCCCAAATTAGAAGGAGAAAGTTTGAAATCTTCTACTACACACATCATTTGTATGCAGTCTTTCTAGTACTTTTCTTGTTTCATGTTGGGGATAGGCACTTTTATACTGTCTTCCCGGGAATATTCCTTTTTAGCCTTGATAAACTGATCCGAATCATACAATCAAGTCCAAAAACTTGCATGGTTTCAGCTAGAATTTTTCCAGGCAGAGCTCTGGAGCTAATTCTGCCCAAAGATCCAGGGATGAAATATAACCCTACTAGTGTTATATTTTTGAAGATTCCAACCATATCTCATCTTCAATGGCACTCTTTCAGTATCATATCTAGTTCCAGGGCTGATGATCACATTTTATCTGTGATAATTAAATGTGAAGGGTGGTGGACTAATTCTCTTTATGATCTGATCCATGCTGAACTAGACAAAACTGCAGATAAAAGGAAGGGAATACCGATTGCTATCGAAGGACCTTATGGACCTGCTTCATTAGACTTTTTGAGATATGACACCCTTCTTCTGGTTGCTGGGGGAAGTGGAATAACCCCATTTCTGAGCATTTTGGCGGAAGCTGATTCAGCTACCAACAAAAGTAGATTTCCCTCGAGAATACAACTTGTGTATGTCATTAAGAAGGCACAAGACTTTTGTCTATTACATCCAATCTCACATCTGTTACTCAACCAATCAACTGAAAAGTTTCATTTGAATCTGAAATTGTTTGTAACCCAAGAAACACAAGCAGAGGTGGGAATTAGGGAGCTACTAAACGAGTTCTTTAAAGTAAGAACCCTGCAAGTGAACAGCATGTGTTCAAATTATGCAGCATACGGGCCTGAAAGTCCATCTTGGATGGCTGCCATTACAGGATTTTGCTCCATCACTTTCCTTATTTTCGTTATCTGTTTCAACCATATTATAATCCCCTCTGGAAAGCGCTCCAAAATGGCCAAAGAAAAGACTCCTTCTTGGGTTGTGGATCTTCTTCTGATAGGTGCTTTTGTCCTAGCTTTAGCTTTTAGCGCCTCGGTGGCAGCTATTTTGAGATGGAGAAGGCTGAGGAAAGGGATTCCACAAATATCACACAGAGAAATCCAACCCCTTGATCTAAGTTCAGCTGAAGCTAGGAATGCACTTGAAGACCATGAAGTGCATTTCGGGGGAAGGCCTAACTTTAAAGATATATTTGGCAAGCTTCATGATGAAAGCGATGGATCTAATATCGGAGTTTTGGTTTGTGGACCTGAGAGCATGAAGGAATCGGTGGCGTTCGCATGCCAGCAGGAATCTGAGTGTTTTAAGGCTAGTGGAAAGAGAACAGAATCCTGCTTCACTTTCCACACTCTCAACTTCACACTGTAG 2136 0.4106 MACSTTLHASILKLLIIFLFAGWVSLWLLKPTQIWTRKWKQAEDSANDTIFGYYGLSFAVYAFPIIAIAIIGLLLLDLKAGYQRSRSARSTPSKSNFFSNPLVVNTTLGILSSIEILIAFLFIVFLAWTYYSRIYTDFKKLMPYKSLKLNTWQLKYHRIATRFGLLAEACMALLLLPILRGLAVFRILGIQFEASVRYHTWIGTAMILFATIHGASTLLVWGVSHHIEDEIWKWQKTGRIYLAGEIALVVGLVIWVTSLPQIRRRKFEIFYYTHHLYAVFLVLFLFHVGDRHFYTVFPGIFLFSLDKLIRIIQSSPKTCMVSARIFPGRALELILPKDPGMKYNPTSVIFLKIPTISHLQWHSFSIISSSRADDHILSVIIKCEGWWTNSLYDLIHAELDKTADKRKGIPIAIEGPYGPASLDFLRYDTLLLVAGGSGITPFLSILAEADSATNKSRFPSRIQLVYVIKKAQDFCLLHPISHLLLNQSTEKFHLNLKLFVTQETQAEVGIRELLNEFFKVRTLQVNSMCSNYAAYGPESPSWMAAITGFCSITFLIFVICFNHIIIPSGKRSKMAKEKTPSWVVDLLLIGAFVLALAFSASVAAILRWRRLRKGIPQISHREIQPLDLSSAEARNALEDHEVHFGGRPNFKDIFGKLHDESDGSNIGVLVCGPESMKESVAFACQQESECFKASGKRTESCFTFHTLNFTL 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00801 711 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 411 515 IPR039261 -
Gma17g00801 711 CDD NOX_Duox_like_FAD_NADP 321 502 - -
Gma17g00801 711 Gene3D - 411 546 IPR039261 -
Gma17g00801 711 Gene3D - 609 709 IPR039261 -
Gma17g00801 711 SUPERFAMILY Riboflavin synthase domain-like 321 419 IPR017938 -
Gma17g00801 711 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 298 423 IPR017927 GO:0016491
Gma17g00801 711 Pfam Ferric reductase NAD binding domain 427 685 IPR013121 GO:0016491
Gma17g00801 711 PANTHER NADPH OXIDASE 2 710 - -
Gma17g00801 711 SFLD Ferric Reductase Domain 31 688 - -
Gma17g00801 711 Pfam FAD-binding domain 321 421 IPR013112 GO:0016491
Gma17g00801 711 Pfam Ferric reductase like transmembrane component 164 284 IPR013130 -
Gma17g00801 711 SFLD Ferric reductase subgroup (FRE) 11 688 - -
Gma17g00801 711 PANTHER FERRIC REDUCTION OXIDASE 8, MITOCHONDRIAL 2 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00801 Gma-Chr17 6707299 6710753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00801 184 711 Miscellaneous Gene Families AT5G50160 48.282 5.24e-180 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00801 K00521 - gmx:100816560 1393.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00801 17 6707299 6710753 Gma17g00801 17 6707299 6710753 ECH
Gma17g00801 17 6707299 6710753 Gma05g00394 05 3713786 3719422 GST