Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00394 ATGGTGCTCCAAAGCAAACGCCCCGATCCAAGGCCAAAGAAGAGGCTTACCCTCAACGAGATGATGAAGTCTAGGAACAGTTTAAGTGGGGGTAGAATGCTAAGGTCTTGCTCACAGATTCAAGAAGCTATTAATTTTAAGAATGCTGTGATGAGTTGGGTTTCTCTTTGGCTTCTGAAGCCAACCCAAATATGGACAACAAAATGGAAACATGCAGAAGATAGCGCCAATGATACAATCTTTGGATACTATGGTCTTAGCTTCGCTGTGTACACATTTCCTATAGTTGCTATTGCTATACTTGGACTTCTTTTATTGGATTTGAAAGCTGGATATCAAAGAAGCAGAAGCGCAAGGAGTCCATCAAAATCAAACTTCTTCTCAAATCCACTGGTGGTGAATAATACACTGAGAATCTTATCCAGTATTGAAATACTGGTAGCTTTCCTTTTTATTGTTTTCTTAGCATGGACCTACTACTCATGGCAACTCAAGTATCACAAAATAGCAATCCGGTTTGGCTTGCTAGCAGAACCTTGCATGGCTCTGTTGCTTCTTCCTATTCTAAGGGGGTTGGCTGTGTTTCGCATACTTGGCATTCAGTTTGAAGCTTCAGTTAGATACCACACATGGGTCGGAACTGCAATGATTATTTTTGCTACAATACATTGCGCAAGCACTTTGTTGGTCTGGGGGATCAGCCACCATATACAGGATGAGATATGGAAGTGGCAAAAGACTGGACGCAAATATCTTGCTGGGGAGATTGCATGTGTTGTTGGGCTAGTCATTTGGGTCACTTCACTTCCCCAAATTAGAAGGAGAAAGTTTGAAATCTTCTACTACACACATCATTTGTATGCATTCTTTCCAGTATTTTTCTTGTTTCATGCTGGGGATAGGCACTTTTATCCGGTCTTCCCGGGAATATTCCTTTTTAGCCTTGATAAACTGATCCGAATCATACAATCAAGTCCAAAAACTTGCATGGTTTCAGCTAGAATTTTTCCCAGCAGAGCTGTGGAGCTAATTCTGCCCGAAGATCCAGGGATGAAATATAACCCTACTTGCGTTATATATTTGAAGATACCAACCATATCTCATCTTCAATGGCACTCTTTCAGTATAATATCTAGTTCCAGGGCTGATGACCACATTTTGTCTGTGATAATTAAATGTGAAGGGTGGTGGGCTAATTCTCTTTATGACCTGATACATGCTGAACTAGACAAAACTGCGGATACAAGGAAGGGAATACCTGTTGCCATCGAAGGACCTTATGGACCTGCTTCATTAGACTTTTTGAGCAGATATGATTCCCTTCTTTTGGTTGCTGGAGGAAGTGGAATAACCCCATTTCTGAGCATTTTGGCAGAAACTGATTCATCTACCAGCAAAAACTTCTGTCTGTTACATCCAATCTCACATCTGTTACTCAACCAATCAACTGAAAAGTTTCATTTGAATCTGAAATTGTTTGTAACCCAAGAAACACAAGCAGGGGTGGGAATTAGGGAGCTATTAAATGAGTTCTTTAAAGTAAGAATCCTGCAAGTGAACATCATGTGTTCAAATTATGCAGCAGATGGGCCTGAAAGTCCATCTTGGATGGCTGCCATTGCAGGATTTTGCTCCATCACTTTCCTTATTTTCCTTATCTGTTTCAACCGTATTATAATTCATTCTGGAAAGCACTCCAAAATGGCCAAAGAAAAGACTCCCTCTTGGGCTGTGGATCTTCTTCTGATAGCTGCTTTTATCCTAGCTTTAGCTTGCAGCGCCTCGGTGGCAGCTATTTTGAGATGGAGAAGGCCGAGGAAAGGGATTCCGCAAAGATCGCATAGAGAAATCAACCCCCTTGATCTAAATACATTTGGCAAGCTCCGAAATGAAATCGGTGGATCTAATAGCGGAGTTTTGGTTTGTGGACCTGAGAGCATGAAGGAATCAGTGGCGTTTGCATGCCAGCAGGAATCCGAGTGTTTTAAAGTTAGTGGAAAGAGAACAGAATCTTGCTTCACTTTCCACTCTCTAAACTTCACGCTGTAG 2049 0.4153 MVLQSKRPDPRPKKRLTLNEMMKSRNSLSGGRMLRSCSQIQEAINFKNAVMSWVSLWLLKPTQIWTTKWKHAEDSANDTIFGYYGLSFAVYTFPIVAIAILGLLLLDLKAGYQRSRSARSPSKSNFFSNPLVVNNTLRILSSIEILVAFLFIVFLAWTYYSWQLKYHKIAIRFGLLAEPCMALLLLPILRGLAVFRILGIQFEASVRYHTWVGTAMIIFATIHCASTLLVWGISHHIQDEIWKWQKTGRKYLAGEIACVVGLVIWVTSLPQIRRRKFEIFYYTHHLYAFFPVFFLFHAGDRHFYPVFPGIFLFSLDKLIRIIQSSPKTCMVSARIFPSRAVELILPEDPGMKYNPTCVIYLKIPTISHLQWHSFSIISSSRADDHILSVIIKCEGWWANSLYDLIHAELDKTADTRKGIPVAIEGPYGPASLDFLSRYDSLLLVAGGSGITPFLSILAETDSSTSKNFCLLHPISHLLLNQSTEKFHLNLKLFVTQETQAGVGIRELLNEFFKVRILQVNIMCSNYAADGPESPSWMAAIAGFCSITFLIFLICFNRIIIHSGKHSKMAKEKTPSWAVDLLLIAAFILALACSASVAAILRWRRPRKGIPQRSHREINPLDLNTFGKLRNEIGGSNSGVLVCGPESMKESVAFACQQESECFKVSGKRTESCFTFHSLNFTL 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00394 682 Gene3D - 421 680 IPR039261 -
Gma05g00394 682 CDD NOX_Duox_like_FAD_NADP 331 496 - -
Gma05g00394 682 Pfam FAD-binding domain 331 431 IPR013112 GO:0016491
Gma05g00394 682 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 421 511 IPR039261 -
Gma05g00394 682 PANTHER FERRIC REDUCTION OXIDASE 8, MITOCHONDRIAL 50 681 - -
Gma05g00394 682 SFLD Ferric Reductase Domain 61 680 - -
Gma05g00394 682 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 308 433 IPR017927 GO:0016491
Gma05g00394 682 Pfam Ferric reductase like transmembrane component 174 293 IPR013130 -
Gma05g00394 682 SFLD Ferric reductase subgroup (FRE) 55 659 - -
Gma05g00394 682 PRINTS Cytochrome B-245 heavy chain signature 633 651 IPR000778 GO:0016020|GO:0016491
Gma05g00394 682 PRINTS Cytochrome B-245 heavy chain signature 252 275 IPR000778 GO:0016020|GO:0016491
Gma05g00394 682 PRINTS Cytochrome B-245 heavy chain signature 277 297 IPR000778 GO:0016020|GO:0016491
Gma05g00394 682 PANTHER NADPH OXIDASE 50 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00394 Gma-Chr5 3713786 3719422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00394 194 682 Miscellaneous Gene Families AT5G50160 44.022 1.02e-150 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00394 K00521 - gmx:100816560 1079.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00394 05 3713786 3719422 Gma05g00394 05 3713786 3719422 ECH
Gma17g00801 17 6707299 6710753 Gma05g00394 05 3713786 3719422 GST