Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00745 ATGGCTTCCTTACCCAGTTTTGCTCCTTTTGTATTTCTATTGCTTGTAATTGGGAGCAATGCAAGGACTTTGTATCCACTTCCCAGCAAAGGTGGTAATGGGAGTAGGAAGCCCCTACAAACTTTTCGCCCTTATAACATTGCTCATCGCGGTTCAAACGGAGAGCTTCCTGAAGAAACGCGTCCTGCATACTTGAGAGCTATTGAGGAGGGTGCAGACTTCATTGAAACTGATGTCTTATCTTCCAAAGATGGTGTTCTTATATGTTTCCATGATGTTACCCTTGATGATACTACTGACATTGCAAATCACACAGGGTTTGCTAACCGTAAAAGAACATATGAAGTCCAAGGGATAAACATGACTGGCTTTTTTCCTGTTGATTTCACATTAAAGGAACTAAAGTCATTGAGGGTGAAGCAGAGGTATAGCTTCAGGGACCAACAATTTAATGGAAAATTTCAAATCATCACTTTTGAAGAGTTCATTACCATAGCACAGGATGCACCCAGAGTTGTTGGAATATATCCAGAGATAAAAAATCCAGTATTTATCAATCAACAAGTTAAATGGTCACATGGCAAAAGATTTGAGGACAAGTTTGTGGAGACACTTCAGAAATATGGGTACAAGGGTTCCTACCTGTCAAAAGATTGGTTGAGACAACCTGTATTTATTCAGTCATTTGCTCCAACTTCACTCGTGTATATATCAAACAAAACGGACTTGCCCAAGATTTTCTTAATTGATGATGTTATTGTTCCAACGCAAGACACTAATCAGTCATTTTGGGAGATTACATCTGATGAATACCTAGACTACATAAAGCAATATGTTGTGGGAATTGGACCTTGGAAGGACACAGTGGTACCTGTGGTAGAAAATTATATGACAAATCCTACTAATCTTGTTGCCAGGGCACATGCTCATAACCTGCAGGTGCATCCATATACTTACCGAAATGAGTTCCCATTTTTGCACTTCAACTTCAGTCAAGATCCGTATATGGAGTATGATTACTGGATCAACAAGATAGGCGTTGATGGTCTCTTTACAGACTTCACTGGTAGTCTTCATCGTTATCAGGAATGGACCTCTAACCATAAAGATGATGATGACAAGAATCTATTGCATAAAATTGCTTTGTTAGTCTCCTCTTATGAATGA 1167 0.3916 MASLPSFAPFVFLLLVIGSNARTLYPLPSKGGNGSRKPLQTFRPYNIAHRGSNGELPEETRPAYLRAIEEGADFIETDVLSSKDGVLICFHDVTLDDTTDIANHTGFANRKRTYEVQGINMTGFFPVDFTLKELKSLRVKQRYSFRDQQFNGKFQIITFEEFITIAQDAPRVVGIYPEIKNPVFINQQVKWSHGKRFEDKFVETLQKYGYKGSYLSKDWLRQPVFIQSFAPTSLVYISNKTDLPKIFLIDDVIVPTQDTNQSFWEITSDEYLDYIKQYVVGIGPWKDTVVPVVENYMTNPTNLVARAHAHNLQVHPYTYRNEFPFLHFNFSQDPYMEYDYWINKIGVDGLFTDFTGSLHRYQEWTSNHKDDDDKNLLHKIALLVSSYE 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00745 388 PANTHER OS01G0763600 PROTEIN 8 387 - -
Gma17g00745 388 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 361 IPR017946 GO:0006629|GO:0008081
Gma17g00745 388 CDD GDPD_ScGlpQ1_like 44 355 - -
Gma17g00745 388 SUPERFAMILY PLC-like phosphodiesterases 44 361 IPR017946 GO:0006629|GO:0008081
Gma17g00745 388 Pfam Glycerophosphoryl diester phosphodiesterase family 49 356 IPR030395 GO:0006629|GO:0008081
Gma17g00745 388 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 8 387 - -
Gma17g00745 388 ProSiteProfiles GP-PDE domain profile. 44 362 IPR030395 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00745 Gma-Chr17 6273073 6277044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00745 4 387 Acyl Lipid Metabolism Gene Families AT1G74210 72.093 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00745 K01126 - gmx:100800181 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00745 17 6273073 6277044 Gma17g00745 17 6273073 6277044 ECH
Gma17g00745 17 6273073 6277044 Gma05g00199 05 1867907 1872017 GST