Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00199 ATGGCTTCCTTACCCAGTTTTACTCCTTTTGTATTTCTATTGCTTGTCATTGGATGCAATGCAAGGCCTTTGTATCCACTTCCCAGCAAAGGTGATGATGGAAATAGGAAGCCCCTACAAACTTTTCGCCCTTATAACATTGCTCATCGCGGTTCAAACGGAGAGCTTCCTGAGGAAACTCATCCTGCATACTTGAGAGCTATTGAGGAGGGTGCAGACTTCATTGAAACTGATATCTTATCATCCAAAGATGGTGTTCTTGTATGTTTCCATGATGTTACCCTTGATAATACTACTGACATTGCAAATCGCACAGAGTTTGCTAATCGTAAAAGAACATATGAAGTCCAAGGGGAAAACATGACTGGCTTTTTTACTGTTGATTTCACATTAAAGGAATTAAAGTCATTGAGGGTGAAACAGAGGTGTAGCTTCAGGGACCAACAGTTTAATGGAAAGTTTCAAATCATCACTTTTGAAGAGTTCATTACCATAGCACTGGATGCACCCAGAGTTGTTGGAATATATCCAGAGATAAAAAATCCAGTATTTATCAATCAACATGTTAAATGGTCCCATGGCAAAAGATTTGAGGACAAGTTTGTGGAGACACTTCAGAAATATGGGTACAAGGGTTCCTACCTGTCAAAAGATTGGTTGAGACAACCTGTATTTATTCAGTCATTTGCTCCAACTTCACTCGTGTATATATCAAATAAAACGGACTTGCCCAAGGTTTTCTTAATTGATGATGTTACTGTTCCAACTCAAGACACTAATCAGTCATATTGGGAGATTACATCTGATGAATACCTAGAGTACATAAAGCAATATGTTGTGGGAATTGGACCTTGGAAGGACACAGTGGTACCTGTGGTAAAAAATTATATGACAAATCCTACTAATCTTGTTGCCAGGGCACATGCTCATAACCTGCAGGTGCATCCATATACTTACCGAAATGAGTTCCCATTTTTGCATTTCAACTTCAGTCAAGATCCGTATATGGAATATGATTTCTGGATCAACAAGATAGGCGTTGATGGTCTCTTTACAGACTTCACTGGTAGTCTTCATCGTTATCAGGAATGGACCTCTAACCGTAAAGATGATGATGATGACAAGACTGAATCCAATCTATTACATAAAATTGCTTTGTTAGTCTCCTCTTATGAATGA 1179 0.3868 MASLPSFTPFVFLLLVIGCNARPLYPLPSKGDDGNRKPLQTFRPYNIAHRGSNGELPEETHPAYLRAIEEGADFIETDILSSKDGVLVCFHDVTLDNTTDIANRTEFANRKRTYEVQGENMTGFFTVDFTLKELKSLRVKQRCSFRDQQFNGKFQIITFEEFITIALDAPRVVGIYPEIKNPVFINQHVKWSHGKRFEDKFVETLQKYGYKGSYLSKDWLRQPVFIQSFAPTSLVYISNKTDLPKVFLIDDVTVPTQDTNQSYWEITSDEYLEYIKQYVVGIGPWKDTVVPVVKNYMTNPTNLVARAHAHNLQVHPYTYRNEFPFLHFNFSQDPYMEYDFWINKIGVDGLFTDFTGSLHRYQEWTSNRKDDDDDKTESNLLHKIALLVSSYE 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00199 392 SUPERFAMILY PLC-like phosphodiesterases 44 361 IPR017946 GO:0006629|GO:0008081
Gma05g00199 392 CDD GDPD_ScGlpQ1_like 44 355 - -
Gma05g00199 392 Gene3D Phosphatidylinositol (PI) phosphodiesterase 42 361 IPR017946 GO:0006629|GO:0008081
Gma05g00199 392 ProSiteProfiles GP-PDE domain profile. 44 362 IPR030395 GO:0006629|GO:0008081
Gma05g00199 392 Pfam Glycerophosphoryl diester phosphodiesterase family 49 356 IPR030395 GO:0006629|GO:0008081
Gma05g00199 392 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 8 391 - -
Gma05g00199 392 PANTHER OS01G0763600 PROTEIN 8 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00199 Gma-Chr5 1867907 1872017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00199 9 391 Acyl Lipid Metabolism Gene Families AT1G74210 73.698 0.0 581
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00199 K01126 - gmx:100778145 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00199 05 1867907 1872017 Gma05g00199 05 1867907 1872017 ECH
Gma17g00745 17 6273073 6277044 Gma05g00199 05 1867907 1872017 GST