Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00735 ATGGCTGCTCTAGCTCTAGCACTGCTTCTTCTGGCTTTCACTGGCACTTCAAGTGCTACATGGTGCGTTTGCAAGGATGGAAGCGACGCGATCCTGCAGAAAACCTTGGACTATGCTTGTGGAGCTGGTGCTGACTGTAATCCTCTCCACCAAAACGGGCCTTGTTTCCAGCCCAACACCGTTAGGGCCCACTGTAACTACGCCGTGAACAGCTACTTCCAAAGGAAGGGTCAAGCTCAAGGGTCCTGCGACTTTGCGGGAACAGCCATTGTTACTGCATCTGACCCCAGCTCTGGCGGTACTTGTGTCTACCCTTCTAGTGTCAGCGCTGCAGGCACTGGTACAACTCCAGTGACTACCACACCAACCATGGGCACCACTCCTACAACTGGAACTCCATCAACAAgcaccggcacgggcaccggcaccggcacaggcaccACTCCATACAGCACAACACCTGGAGTATTAGGAGGCATTGGCAGTGGCATGGGACCTTCAGGATCCGGCATGAATGACGAAAGTCACGGTGGCATTGGACTTGTACACAGCAGTAGTTTCTTCTCGATGGCGCTCTTCTCTGCCTTCATGATGATGCTCTGCTGGGGTTGA 612 0.4984 MAALALALLLLAFTGTSSATWCVCKDGSDAILQKTLDYACGAGADCNPLHQNGPCFQPNTVRAHCNYAVNSYFQRKGQAQGSCDFAGTAIVTASDPSSGGTCVYPSSVSAAGTGTTPVTTTPTMGTTPTTGTPSTSTGTGTGTGTGTTPYSTTPGVLGGIGSGMGPSGSGMNDESHGGIGLVHSSSFFSMALFSAFMMMLCWG 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00735 203 Pfam X8 domain 20 89 IPR012946 -
Gma17g00735 203 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1 1 191 - -
Gma17g00735 203 Gene3D - 15 112 - -
Gma17g00735 203 SMART X8_cls 20 104 IPR012946 -
Gma17g00735 203 MobiDBLite consensus disorder prediction 111 152 - -
Gma17g00735 203 PANTHER BETA-1,3 GLUCANASE 1 191 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00735 Gma-Chr17 6212837 6217090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00735 16 134 Glycoside Hydrolase AT1G66250 38.843 1.04e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00735 - - gmx:100797001 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00209 05 1937958 1942638 Gma17g00735 17 6212837 6217090 ECH
Gma17g00735 17 6212837 6217090 Gma17g00735 17 6212837 6217090 ECH
Gma17g00735 17 6212837 6217090 Gma05g00209 05 1937958 1942638 GST