Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00209 ATGGCTGCTCTAGCTCTAGCACTTCTTCTTCTGGCTTTCACCGGCACTTCAAGTGCTACATGGTGCGTTTGCAAGGATGGAAGCGACGCGATCCTGCAGAAGACGTTAGACTATGCTTGTGGAGCTGGTGCTGACTGTAACCCTCTTCACCTAAACGGGCCTTGTTTTCAGCCCAACACCGTCAGGGCCCACTGTAACTACGCCGTGAACAGCTACTTCCAAAAGAAGGGTCAAGCTCAAGGGTCATGCGAGTTTGCGGGAACAGCCACTGTTACTGCATCTGACCCCAGCTCTAGCGGTTGTGTCTACCCTTCTAGCGTCAGCGCTGCAGGCACTGGTACAACTCCTGTGACTACTACACCAACAATGGGCACTACTCCTACAACTGGAACTCCATCAACAAGCACCGGCACCGGCACTGGCACCGGCACCACCACTGGTACCACTCCATACAGCACAACACCTGGAGTATTAGGAGGCATTGGCAGTGGCATGGGACCTTCAGGATCCGGCATGAACGATGAAAGTCACGGTGGCATTAGATTTGTTCACAGCAGTAGTTTCTTCTCGATCGCGATCGCCCTCATCTCTGCCTTCATGATGCTCTGCTGGGGTTGA 618 0.5356 MAALALALLLLAFTGTSSATWCVCKDGSDAILQKTLDYACGAGADCNPLHLNGPCFQPNTVRAHCNYAVNSYFQKKGQAQGSCEFAGTATVTASDPSSSGCVYPSSVSAAGTGTTPVTTTPTMGTTPTTGTPSTSTGTGTGTGTTTGTTPYSTTPGVLGGIGSGMGPSGSGMNDESHGGIRFVHSSSFFSIAIALISAFMMLCWG 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00209 205 Gene3D - 15 112 - -
Gma05g00209 205 Pfam X8 domain 20 90 IPR012946 -
Gma05g00209 205 MobiDBLite consensus disorder prediction 111 156 - -
Gma05g00209 205 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 191 - -
Gma05g00209 205 PANTHER BETA-1,3 GLUCANASE 1 191 IPR044788 -
Gma05g00209 205 SMART X8_cls 20 103 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00209 Gma-Chr5 1937958 1942638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00209 21 115 Miscellaneous Gene Families AT2G16230 44.792 5.54e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00209 - - gmx:100500078 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma05g00209 05 1937958 1942638 Gma17g00735 17 6212837 6217090 ECH
Gma05g00209 05 1937958 1942638 Gma05g00209 05 1937958 1942638 ECH
Gma17g00735 17 6212837 6217090 Gma05g00209 05 1937958 1942638 GST