Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00723 ATGTTTGGTTCAAAGAAATCTCCTTTGAAGGTTGCTAAACCTAGCTCCGTTGAGTCTTGGACGAATCCATTTGATTCTAATGATGAGGGAATGGATACCAAAAAGTATAGTTCCTCTAGAAAGACTTCTTCGGAGCGTGCACTTACTACACTGGGAGTTAACACCAACCCCTTTGATGATGGCACTGATGCCAATAAGAAATCTTCATCAACTTTGTATGGCTTTCAATCTGCCAACTGGAACAAGTATAAGAATGATTTCCGTGATTCTGGTGGACTAGAGAATCAATCGGTTCAAGAATTGGAGAGTTATGCTGTTTACAAGGCTGAAGAAACTACAAATTCAGTCACAAATTGTTTGAAGATAGCAGAGAACATAAGAGAGGAGGCTACCCAGACACTAGTCACCCTTCATCAACAGGGTGAACAAATTACCAGGAGTCACCATGTTGCTGCTGACATCGATCATGATCTAACTCGGGGAGAAAAGCTCTTGGGAAGCCTTGGTGGCCTCTTCTCCAAAACTTGGAAACCAAAGAAGACACGTGCAATAACCGGCCCTGTTATTGTTGGAGatgATCCAGTCAGGAGAAAGGGTAATCACTTGGAGCAAAGAGAGAAGTTGGGGCTGACTTCTGCACCCAAAGGGCAGTCCAAGCTACGGTCCCCACCTCAAGAACCAACAAATGCATTTGAAAAAGTTGAGGTTGAGAAAAATAAGCAAGATGATGCACTATCAGATTTAAGTGATCTGTTGGGAGAGCTTAAAGGCATGGCTGTTGACATGGGATCCGAGATTGAGAGGCATAACAAAGCCCTGAATCATCTCTATGATGATGTGGATGAGTTGAATTTCCGAGTGATAGGTGCTAACCAACGTGGACGTCGTTTGCTCGGAAAATAA 903 0.4319 MFGSKKSPLKVAKPSSVESWTNPFDSNDEGMDTKKYSSSRKTSSERALTTLGVNTNPFDDGTDANKKSSSTLYGFQSANWNKYKNDFRDSGGLENQSVQELESYAVYKAEETTNSVTNCLKIAENIREEATQTLVTLHQQGEQITRSHHVAADIDHDLTRGEKLLGSLGGLFSKTWKPKKTRAITGPVIVGDDPVRRKGNHLEQREKLGLTSAPKGQSKLRSPPQEPTNAFEKVEVEKNKQDDALSDLSDLLGELKGMAVDMGSEIERHNKALNHLYDDVDELNFRVIGANQRGRRLLGK 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00723 300 Gene3D - 92 169 - -
Gma17g00723 300 SUPERFAMILY SNARE fusion complex 96 166 - -
Gma17g00723 300 MobiDBLite consensus disorder prediction 42 69 - -
Gma17g00723 300 MobiDBLite consensus disorder prediction 1 69 - -
Gma17g00723 300 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 1 300 - -
Gma17g00723 300 MobiDBLite consensus disorder prediction 189 229 - -
Gma17g00723 300 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 1 300 - -
Gma17g00723 300 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 235 297 IPR000727 -
Gma17g00723 300 Gene3D - 232 299 - -
Gma17g00723 300 SUPERFAMILY SNARE fusion complex 234 298 - -
Gma17g00723 300 Coils Coil 120 140 - -
Gma17g00723 300 SMART tSNARE_6 230 297 IPR000727 -
Gma17g00723 300 SMART tSNARE_6 101 168 IPR000727 -
Gma17g00723 300 CDD SNARE_Qc 238 296 - -
Gma17g00723 300 CDD SNARE_SNAP25N_23N_29N_SEC9N 104 167 IPR044766 GO:0005484|GO:0031201
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00723 Gma-Chr17 6120801 6123626 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00723 K18211 - gmx:100793323 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00723 17 6120801 6123626 Gma05g00224 05 2061091 2063967 GST