Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00722 ATGGGAATCCACCTCGGCTTGTTTCTCTTTCTGGCTTCTCTTCGAATGACTTTATCTCAAGATGTTGAACATGGTTCAGTTCTAGTAGATGGAATTCAAGCAATTGCTGAAACTGATGATAACTTCATCTGTGCTACTATTGATTGGTGGCCTCATGATAAGTGTGATTACAACTATTGCCCCTGGGGGGATTCATCTGCTGTAAATTTGgacttgtctcatcctttctttgccaaggcaatcCAAGCTCTCAAGCCTTTGAGGATAAGAGTTGGAGGTTCTTTGCAAGACCAAGTGCTGTATGAGGTTGGAAGTTTGAAGTCCCCTTGTCATCCATTTCAAAAGATGAAAGGTGGATTGTTTGGATTTTCAAAGGGATGTTTACAAATGAAAAGGTGGGATGAGCTGAATCATTTTTTCGATGAGACAGGGGCCCTTGTGACATTTGGTTTGAATGCACTCCGTGGGAGGCATCAGATTAGTCATACTGTTTGGGGAGGAGACTGGGACCCATCCAATGCCAAAGATTTTATCAGTTACACTATTTCAAAGGGGTACAAAATTGATTCATGGGAATTTGGTAATGAGTTGAGTGGGAAGGGCATTGGGGCTAGTGTTGGTGCTGCACAGTATGGGAAAGACTTGATAAAGCTTAAAGAAATTTTACACACATTATACAAAAACTCCACGTTCAAACCTTCCCTTGTAGCACCCGGAGGATTCTATAATAAGGAGTGGTTTGATAAGCTTCTTCAGGTTACAGGTCCAGGCATTGTCAATGTGCTGACTCATCACGTGTATAATTTGGGCCCAGgtagtgatgagcatcttgataggaagattctagatcctgagaacttgagcaagatagaatcaatttttagcaatctttcagaaaccattcaaaaatatggcccttggtcttctgcatgggtaggtgaagctggcggagcattcaacagtggtggtcgttcaatttctaacacatttgtgaatagcttttggtacttagatcaacttggaatagcatctagatacaacactaaggtttattgcaggcagactttaattggaggaaactatggtcttctcaataccactactttcattccaaatcctgactactacagtgcacttttgtggcgtcagctaatggggaagactgttcttgcagctagtagtgatgttTTTTCACCATCTTTACGCACTTATGCCCATTGTTCAAAAGGCAGAGATGGTATAACATTACTGCTGATCAATTTAAGCAATCAGACTCATTTCACACTCACGGTTCATGACCGGGTGCCTGTGAGCAATGGAGGAAATGAAAATGCTAAAAGCATCCATACAGAAAACTCATTCTTTAGTCATCTCAAGAGGGCATTTTCTTGGATTGGAACAAAAGGATCAGATGTCACATTCAGGGAGGAGTACCAATTAACTCCAAAAGATGATTACCTTAGAAGCCAAACCATGTTGCTGAATGGTATTCCTCTAGAGTTGACAAATGATGGAGAAATTCCAACATTGGATCCACTACTCAATAATGTACATTCTCCAATACACTTGGCTCCTTTATCCATTGCTTTTATTGTATTCCCCAACTTTGATGCTCCGGCTTGTGCTGAACACAGAAAACTTTAA 1644 0.309 MGIHLGLFLFLASLRMTLSQDVEHGSVLVDGIQAIAETDDNFICATIDWWPHDKCDYNYCPWGDSSAVNLDLSHPFFAKAIQALKPLRIRVGGSLQDQVLYEVGSLKSPCHPFQKMKGGLFGFSKGCLQMKRWDELNHFFDETGALVTFGLNALRGRHQISHTVWGGDWDPSNAKDFISYTISKGYKIDSWEFGNELSGKGIGASVGAAQYGKDLIKLKEILHTLYKNSTFKPSLVAPGGFYNKEWFDKLLQVTGPGIVNVLTHHVYNLGPGSDEHLDRKILDPENLSKIESIFSNLSETIQKYGPWSSAWVGEAGGAFNSGGRSISNTFVNSFWYLDQLGIASRYNTKVYCRQTLIGGNYGLLNTTTFIPNPDYYSALLWRQLMGKTVLAASSDVFSPSLRTYAHCSKGRDGITLLLINLSNQTHFTLTVHDRVPVSNGGNENAKSIHTENSFFSHLKRAFSWIGTKGSDVTFREEYQLTPKDDYLRSQTMLLNGIPLELTNDGEIPTLDPLLNNVHSPIHLAPLSIAFIVFPNFDAPACAEHRKL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00722 547 Gene3D Glycosidases 64 383 - -
Gma17g00722 547 PANTHER GLYCOSIDE HYDROLASE FAMILY 79 AMINO-TERMINAL DOMAIN PROTEIN 1 546 - -
Gma17g00722 547 SUPERFAMILY (Trans)glycosidases 38 385 IPR017853 -
Gma17g00722 547 PANTHER HEPARANASE-RELATED 1 546 - -
Gma17g00722 547 Pfam Glycosyl hydrolase family 79, N-terminal domain 25 341 IPR005199 GO:0016020|GO:0016798
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00722 Gma-Chr17 6114606 6119148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00722 3 542 Glycoside Hydrolase AT5G07830 60.662 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00722 K07964 - gmx:100792792 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00722 17 6114606 6119148 Gma17g00722 17 6114606 6119148 ECH
Gma17g00722 17 6114606 6119148 Gma05g00225 05 2065754 2069661 GST