Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma05g00225 ATGGGAATCCACCTCGCCTTGTTTCTCTTTCTGGCTTTTCTTCGAATGACTTTATCTCAAGATATTGAACATGGTTCAATTCTAGTAGATGGAATTCAAGCAATTGCTGAAACTGATGATAATTTCATCTGTGCTACTATTGATTGGTGGCCTCATGATAAGTGTGATTACAACTATTGCCCCTGGGGGGATTCATCTGCTGTAAATTTGgacttgtctcatcctttctttgccaaggcaatcCAAGCTCTCAAGCCTTTGAGGATAAGAGTCGGAGGTTCTTTGCAAGACCAAGTGCTGTATGAGGTAGGAAGTTTGAAGTCCCCTTGTCATCCATTTCAAAAGATGAAAGGTGGATTGTTTGGATTTTCAAAGGGATGTTTACAGATGAAAAGGTGGGATGAGCTGAATCATTTTTTCGACGAGACAGGTGCCCTTGTGACATTTGGTTTGAATGCACTCCATGGGAGGCACCAGATTAGTCATACTGTTTGGGGAGGAGACTGGGATCCTTCCAATGCCAAAGATTTTATCAATTACACCATTTCAAAGGGGTACAAAATTGATTCATGGGAATTTGGTAATGAGTTGAGTGGGAAGGGCATTGGGGCTAGAGTTGGTGCTGCACAGTATGGGAAAGACTTGATAAAGCTTAAAGAAATTTTACGCACATTATACAAAAACTCCACGTTCAAACCTTCCCTTGTAGCACCTGGAGGATTCTATAATAAGGAGTGGTTTGATAAGCTTCTTCAGGTTACAGGTCCAGGCATAGTCAATGTGCTGACACATCATGTGTATAATTTGGGCCCAGgtagtgatgagcatcttgacaggaagattctagatcctgagtgcttgagcaaggttgaatcaatttttagcaatctttcagaaaccattcaaaaatatggcccttggtcttctgcatgggtaggtgaagctggcggggcattcaacagtggtggtcgttctgtttctaacacatttgtaaatagcttttggtacttggatcaacttggaatagcatccagatacaacactaaggtttattgcaggcagactttaattggaggaaactatggtcttctcaataccactactttcattccaaatcctgactattacaggcaagtcctggtgttgtttttgagcagtgcactgttgtggcatcagctaatggggaagactgttcttgcagctagtagtgatgttTTTTCACCATCTTTACGCACTTATGCCCATTGTTCAAAAAGCAGAGATGGTATAACATTACTGCTGATCAACTTAAGCAATCAGACTCATTTCACACTCACGGTTCATGACCGTGTGCCTGTGAGCAATGGAGGAAATGAAAATGCTAAAAGCATCCATACAGAAAACTCATTCTTTAGTCATCTCAAGAAAGCATTTTCTTGGATTGGAACAAAAGGATCAGATGTCACATTCAGGGAGGAGTACCACTTAACTCCAAAAGATGATTACCTTAGAAGTCAAACCATGTTGCTGAATGGTATCCCCCTAGAATTGACAAATGATGGAGAAATTCCAACATTGGATCCACTACTCAATAATGTACATTCTCCAATACACTTGGCTCCTTTATCCATTGCATTTATTGTATTCCCCAACTTTGATGCTCCAGCTTGTGCGGGACTTAGAAAACCTTAA 1671 0.301 MGIHLALFLFLAFLRMTLSQDIEHGSILVDGIQAIAETDDNFICATIDWWPHDKCDYNYCPWGDSSAVNLDLSHPFFAKAIQALKPLRIRVGGSLQDQVLYEVGSLKSPCHPFQKMKGGLFGFSKGCLQMKRWDELNHFFDETGALVTFGLNALHGRHQISHTVWGGDWDPSNAKDFINYTISKGYKIDSWEFGNELSGKGIGARVGAAQYGKDLIKLKEILRTLYKNSTFKPSLVAPGGFYNKEWFDKLLQVTGPGIVNVLTHHVYNLGPGSDEHLDRKILDPECLSKVESIFSNLSETIQKYGPWSSAWVGEAGGAFNSGGRSVSNTFVNSFWYLDQLGIASRYNTKVYCRQTLIGGNYGLLNTTTFIPNPDYYRQVLVLFLSSALLWHQLMGKTVLAASSDVFSPSLRTYAHCSKSRDGITLLLINLSNQTHFTLTVHDRVPVSNGGNENAKSIHTENSFFSHLKKAFSWIGTKGSDVTFREEYHLTPKDDYLRSQTMLLNGIPLELTNDGEIPTLDPLLNNVHSPIHLAPLSIAFIVFPNFDAPACAGLRKP 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma05g00225 556 PANTHER HEPARANASE-RELATED 1 552 - -
Gma05g00225 556 PANTHER GLYCOSIDE HYDROLASE FAMILY 79 AMINO-TERMINAL DOMAIN PROTEIN 1 552 - -
Gma05g00225 556 SUPERFAMILY (Trans)glycosidases 38 379 IPR017853 -
Gma05g00225 556 Pfam Glycosyl hydrolase family 79, N-terminal domain 25 341 IPR005199 GO:0016020|GO:0016798
Gma05g00225 556 Gene3D Glycosidases 64 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma05g00225 Gma-Chr5 2065754 2069661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma05g00225 1 551 Glycoside Hydrolase AT5G07830 59.643 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma05g00225 K07964 - gmx:100782283 1127.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00722 17 6114606 6119148 Gma05g00225 05 2065754 2069661 GST