Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00569 ATGGGATGTTCTCAATCAAAGTTGGATGATGAAGAGGCAGTCAAGCTTTGCAAAGATAGAAAGCAATTCATCAAACAGGCTGTTGAGCAAAGAGCTCAATATGCTACTGGACATGTAGCATACATTCAGTCTCTGAAAAGGGTGTCAGCTGCACTGCTAGATTACTTCAAAGCCAATGAGTCGCGTGAGTTGTCATTGGATTCATTCATAACTCCACCTTTCACACCTGTGAAGAAAACTAGTCCTGCTTTCATTCCCATTTCATCAAAATCCTTCACCCCAACAACAATTGAGTTTGGTCCCAAGACAACTTTGAAGGTGAATTACCTAAGGCCGAGTGGTAATCCGGCGATTTCTGTCGAGGAAAGGCCTCGATCGCCTGAAATGGTTCGGGTTGAAAGTTATTCTCCAATGCATCAGTTTGGCATTGAGGGTTTTTTTCCAATGCAATCCTCACCTGTGAATCCCTCAATTTATTCTCCCCATAACAGGCCTAATATCCCTCCACCTTCACCTCGGTCTTCCCAATGGGATTCCTTTTGGAATCCATTTTCATCATTGGACTATTATGGTTACCCCACCCAAAGTAGCCTTGATTGGACCGGAACGGATGATGAGATCAGAGGACTGAGGAAGGTTCGAGAAGAAGAGGGAATACCAGACCTGGAAGAAGATGAAACTGAGCAAGAAGAATTTGCTGTAAAGAAAAATGTAGCAGAAGAAAGAGCCAAAATTGATGTAAACCCCTCCAAAGAAGAAGTCACGGTTGCAGATGTTGATGAACATGAGGAAGAAGAAGAAGAGGGAACAGATGCTGAAACTGGAATAGCGAATGAAGTCACAGACTCACAAGCCAATGGCATTGAATGTTTTCAAGTATCTAAAGCTCAAACTACGGGTCAGGAAATGGAAACTGGTAATCAAGAAGCAAAGGAAGAAACACCTGGTTTTACTGTTTATGTAAACCGAAGGCCCACAAGCATGGCTGAAGTGATCAAGGATCTTGAAGCTCAATTCACAATAATCTGCAATGCAGCCAATGATGTCTCAGCATTGTTAGAGGCCAAGAAAGCTCAATATTTATCAACATCTAATGAACTGTCAGCTTCAAAATTGTTGAACCCAGTGGCGCTTTTCCGCTCAGCTTCATTGCACTCATCCACATCAAGATTCTTAATGAATTCTTCAAACACTAGGGATGAGGATTACGAAGGCCCCGATGATCCATCAGAGGAACATTGTTTGTTTTCTGTTAGTCATCAGTCCACACTAGACAGGTTATATGAATGGGAGAAGAAGCTCTACGAGGAAGTCAAGTCAGGAGAACGTGTTCGCATTGCATATGAGAAGAAATGTCAGCAACTCAGGAATCATGATATAAATGGAGAGGAACCTTCTTCTCTTGATAAAACAAGAGCAGCCATTAGAGATTTACATACCCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCAGGAGAATTGAAACTCTAAGGGATGGAGAGTTGCATCCTCAGCTTCTTGAATTGGTGCAAGGGCTTGCCAAGATGTGGAAAGTGATGGCAGAATGTCACCAGACACAGAAGAGAACCTTAGATGAAGCCAAGATTCTTCTAGTTGACAATGATGCCAGAAAACAGTGTGCCACATCACGAACTGATCCTCAAAGGCTTGCTCATTCTGCCTCCAATCTTGAAACCGAATTGAGGCATTGGCGAAACACCTTTGAGTCATGGATCACTTCTCAAAGATCCTATATTAATGCTCTAACTGGCTGGCTTCTAAGATGTGTGAGATGTGAACATGATCCATCAAAGCTAGCATGCTCTCCTTGCAGGTCCAGTGGCACTCATCCACTATTTGGACTTTGTGTTCAATGGTCAAGGCATCTAGACGCCCTCCAAGAAACAGCAGTGCTTGATGGCATAGACTTTTTTGCAGCTGGCATGGGGTCCCTCTATGCACAACAGTTAAGAGAAGAGACTCGACGAAATCCAGATGGATCAAAAGAACATGGTGAGAATATGGAAATGGTGGAAGTTGGTCAGGTTGAAGAGGTAATGAATACTGAGAAATTGGCTGAAGTTGCTATCAAGGTGCTTTGTGCTGGTATGTCAATTGCTATGAGCTCAATGGCAGAGTTTGCTGTTGATTATGCTGAGGGATACACTGAACTTGCTAAGAAGTGGGAGAAAGTGAACTTGCAGCAGATTTCTTGTGGGGCTGGAACATAG 2238 0.4298 MGCSQSKLDDEEAVKLCKDRKQFIKQAVEQRAQYATGHVAYIQSLKRVSAALLDYFKANESRELSLDSFITPPFTPVKKTSPAFIPISSKSFTPTTIEFGPKTTLKVNYLRPSGNPAISVEERPRSPEMVRVESYSPMHQFGIEGFFPMQSSPVNPSIYSPHNRPNIPPPSPRSSQWDSFWNPFSSLDYYGYPTQSSLDWTGTDDEIRGLRKVREEEGIPDLEEDETEQEEFAVKKNVAEERAKIDVNPSKEEVTVADVDEHEEEEEEGTDAETGIANEVTDSQANGIECFQVSKAQTTGQEMETGNQEAKEETPGFTVYVNRRPTSMAEVIKDLEAQFTIICNAANDVSALLEAKKAQYLSTSNELSASKLLNPVALFRSASLHSSTSRFLMNSSNTRDEDYEGPDDPSEEHCLFSVSHQSTLDRLYEWEKKLYEEVKSGERVRIAYEKKCQQLRNHDINGEEPSSLDKTRAAIRDLHTQITVSIHSVEAISRRIETLRDGELHPQLLELVQGLAKMWKVMAECHQTQKRTLDEAKILLVDNDARKQCATSRTDPQRLAHSASNLETELRHWRNTFESWITSQRSYINALTGWLLRCVRCEHDPSKLACSPCRSSGTHPLFGLCVQWSRHLDALQETAVLDGIDFFAAGMGSLYAQQLREETRRNPDGSKEHGENMEMVEVGQVEEVMNTEKLAEVAIKVLCAGMSIAMSSMAEFAVDYAEGYTELAKKWEKVNLQQISCGAGT 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00569 745 PANTHER UNCHARACTERIZED 1 737 - -
Gma17g00569 745 MobiDBLite consensus disorder prediction 258 273 - -
Gma17g00569 745 Pfam Protein of unknown function (DUF630) 1 57 IPR006868 -
Gma17g00569 745 MobiDBLite consensus disorder prediction 253 275 - -
Gma17g00569 745 PANTHER DUF630 FAMILY PROTEIN 1 737 - -
Gma17g00569 745 Pfam Protein of unknown function (DUF632) 328 651 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00569 Gma-Chr17 4723096 4726790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma17g00569 1 681 Acyl Lipid Metabolism Gene Families AT2G27090 28.287 3.72e-63 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00569 - - gmx:100776480 1417.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00569 17 4723096 4726790 Gma17g00569 17 4723096 4726790 ECH
Gma17g00569 17 4723096 4726790 Gma13g00796 13 22235900 22239633 GST
Gma17g00569 17 4723096 4726790 Gma15g01528 15 14308553 14312455 PCT
Gma17g00569 17 4723096 4726790 Gma09g00522 09 5401091 5405575 PCT
Gma15g01528 15 14308553 14312455 Gma17g00569 17 4723096 4726790 PCT
Gma09g00522 09 5401091 5405575 Gma17g00569 17 4723096 4726790 PCT