Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00796 ATGGGATGTTCTCAATCAAAGTTGGATGATGAAGAGGCAGTTAAGCTTTGCAAAGATAGAAAGCGATTCATCAAACAGGCTGTTGAGCAAAGAACTCAATTTGCTACTGGACATGCAGCATACATTCAGTCTTTGAAAAGGGTTTCAGCGGCACTGCTAGATTACTTGGAAGGCGATGAGTCGCGCCAGTTGCCATTGGATTCATTCATAACCCCACCTTTCACTCCTGTGAAGAAAACTAGTCGTCCTGCTTTCATCCCCATATCATCAAAATCCTTCACCCCAACAACAATTGAGTTTGGTCCCAAGACAACTTTGAAGGTGAATTACCTAAGGCCGAGTGGTAATCCAGCGATTTCTGTTGAGGAAAGGCCTCAATCGCCTGAGATGGTTCGGGTTGAAATGCATTCTCCAATGCATCAGTTTGGCATTGAGGGTTTTTTTCCTATGCAATCCTCACCCGTGAATCCCTCAATTTTTGCTTATTCTCCCAATAACAGGCCTAATATCCCTCCACCTTCACCTCAATCTTCCCAATGGGATTCCTTTTGGAATCCATTTTCATCATTGGACTATTATGGTTACCCCGCCCAAAGTAGCCTTGATAGGACTGGAACTGATGATGAGATCAGAGGACTGAGGAAGGTTCGAGAAGAAGAAGGAATACCAGACCTGGAAGAAGATGAAACTGAACAAGAAGAATTTGCTATAAAGAGAAATGTAGCAGAAGAAAGAGCCAAAATTGATGTAAACCCCTCCAAAGAAGAAGTCGCAGTTGAAGATGTTTATGAACATGAGGAGGAAGAGGAAGAGGAGGCAACAGGTGCTGAAACTGGAATTGCAAATGAAGTCTCAGACTCACAAGCCAATGGCAGTGAATGTTTTCAAGCATCTAAAGCTCAAACTGTGGGCCAGGAAATGGCAACTGGTAATCAAGAAGCAAAGGAGGAAACACCTGGTTTTACTGTTTATGTAAACCGAAGGCCCACAAGCATGGTTGAAGTGATCAAGGATCTTGAAGCTCAATTCACAATAATCTGCAATGCAGCCAATGATGTCTCAGCATTGTTAGAGGCCAAGAAAGCTCAGTATTTATCAACATCTAACGAACTGTCAGCTTCAAAATTGTTGAACCCAGTGGCACTTTTCCGATCAGCTTCATCACACTCATCCTCATCAAGATTTTTAATGAATTCTTCAAACTCTAGGGATGAGGATTACGAAGGCACCAATGATCCATCAGAGGAACATTGTTTGTTTTCTGTTAGTCATCAGTCAACATTAGACAGGTTATATGAATGGGAGAAGAAGCTCTACGAGGAAGTTAAGTCTGGAGAACGTGTTCGAATTGCATATGAGAAGAAATGCCAGCAACTCAGGAATCATGATGTAAATGGAGAGGAACCTTCTTCTCTTGATAAAACAAGAGCGGCCATGAGAGATCTACATACCCAGATAACAGTTTCAATACACTCAGTTGAAGCTATTTCCGGGAGAATTGAAACTCTAAGGGATGAAGAGTTGCATCCCCAGCTTCTTGAATTGGTGCAAGGGCTGGCCAAGATGTGGAAAGTGATGGCAGAATGTCATCAGACACAGAAGAGAACCTTAGATGAAGCCAAGATTCTTCTAGTTGACACTGATGCCCGAAAACAATGTGCCACATCACTAACTGATCCTCAAAGGCTTGCTCGTTCTGCCTCCAATCTTGAAAATGAATTGAGGCATTGGCGAAACACCTTTGAGTCTTGGATCACTTCTCAAAGATCCTATATTCATGCTCTAACTGGCTGGCTTCTAAGATGTGTGAGATGTGAGCATGATCCATCAAAGTTAGCATGCTCTCCTCGTAGGTCCAGTGGTACTCATCCATTATTTGGACTTTGTGTTCAGTGGTCAAGACGTCTAGACGCCCTCCAAGAAACAGCAGTGCTTGATGGCATAGACTTTTTTGCAGCTGGCATAGGGTCCCTCTATGCACAACAATTAAGAGAAGAGACTCGACGAAATCCAGATGGATCAAAAGAACATGGTGAGATTATGGAAATGCTGGAAGTTGGTCAGGTTGAAGAGGTAATGAATACTGAGAAATTGGCTGAAGTTGCTATTAAGGTGCTTTGTGCTGGTATGTCAACTGCTATGAGGTCAATGGCAGAGTTTGCTGTTGATTATGCTGAGGGATACAATGAACTTGCTAAGAGATGGGAGAATGTGAACCTGCAGCAGATTTCTTGTGGGGCTGGAACATAG 2250 0.4298 MGCSQSKLDDEEAVKLCKDRKRFIKQAVEQRTQFATGHAAYIQSLKRVSAALLDYLEGDESRQLPLDSFITPPFTPVKKTSRPAFIPISSKSFTPTTIEFGPKTTLKVNYLRPSGNPAISVEERPQSPEMVRVEMHSPMHQFGIEGFFPMQSSPVNPSIFAYSPNNRPNIPPPSPQSSQWDSFWNPFSSLDYYGYPAQSSLDRTGTDDEIRGLRKVREEEGIPDLEEDETEQEEFAIKRNVAEERAKIDVNPSKEEVAVEDVYEHEEEEEEEATGAETGIANEVSDSQANGSECFQASKAQTVGQEMATGNQEAKEETPGFTVYVNRRPTSMVEVIKDLEAQFTIICNAANDVSALLEAKKAQYLSTSNELSASKLLNPVALFRSASSHSSSSRFLMNSSNSRDEDYEGTNDPSEEHCLFSVSHQSTLDRLYEWEKKLYEEVKSGERVRIAYEKKCQQLRNHDVNGEEPSSLDKTRAAMRDLHTQITVSIHSVEAISGRIETLRDEELHPQLLELVQGLAKMWKVMAECHQTQKRTLDEAKILLVDTDARKQCATSLTDPQRLARSASNLENELRHWRNTFESWITSQRSYIHALTGWLLRCVRCEHDPSKLACSPRRSSGTHPLFGLCVQWSRRLDALQETAVLDGIDFFAAGIGSLYAQQLREETRRNPDGSKEHGEIMEMLEVGQVEEVMNTEKLAEVAIKVLCAGMSTAMRSMAEFAVDYAEGYNELAKRWENVNLQQISCGAGT 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00796 749 MobiDBLite consensus disorder prediction 256 279 - -
Gma13g00796 749 MobiDBLite consensus disorder prediction 261 276 - -
Gma13g00796 749 MobiDBLite consensus disorder prediction 392 414 - -
Gma13g00796 749 MobiDBLite consensus disorder prediction 214 233 - -
Gma13g00796 749 PANTHER DUF630 FAMILY PROTEIN 1 741 - -
Gma13g00796 749 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Gma13g00796 749 PANTHER UNCHARACTERIZED 1 741 - -
Gma13g00796 749 Pfam Protein of unknown function (DUF632) 332 655 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00796 Gma-Chr13 22235900 22239633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00796 1 691 Acyl Lipid Metabolism Gene Families AT2G27090 27.851 8.07e-63 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00796 - - gmx:100818631 1393.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00796 13 22235900 22239633 Gma13g00796 13 22235900 22239633 ECH
Gma17g00569 17 4723096 4726790 Gma13g00796 13 22235900 22239633 GST
Gma13g00796 13 22235900 22239633 Gma15g01528 15 14308553 14312455 PCT
Gma13g00796 13 22235900 22239633 Gma09g00522 09 5401091 5405575 PCT
Gma15g01528 15 14308553 14312455 Gma13g00796 13 22235900 22239633 PCT
Gma09g00522 09 5401091 5405575 Gma13g00796 13 22235900 22239633 PCT