Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00519 ATGGTGGCGAAGAAGCCGCTAATTGTGATAATTGGAGCTGGAATGGCAGGGCTCACTGCTGCCAACAAGCTTCACAGTGTGAGTGCCTCAAAGGACTTGTTTGAGGTGTGTGTTGTTGAAGGTGGAAACAGGATTGGTGGGAGAATCAACACATCAGAGTTTGGTGGTGACCGAATTGAGATGGGTGCTACTTGGATCCATGGAATTGGAGGCAGCCCAATTCACAAAATTGCTCAACAAATCCATGCACTTGACTCTGAGCAACCTTGGGAGTGCATGGATGGGAATGAGAATAAGGCCACCACAATTGCTGAAGGTGGCTTTGTGCTAAACCCTTCTTCCCATGTTGACCCCATCACAAAGCTTTTCAACAATCTCATGGATCATGCTCAGAGAAAGATGCCAACAACAACAAAGGGTGACTGTGGAAACCTTAGTGTTGGCTCTTTTCTTAAACAAGGCCTTGATGCTTATTGTGGTTCATCAAAAGAGGAAGAGGAGCTCAAAGGGTTTGGAAAATGGAGCAAAAAGTTACTCGATGAAGCAATCTTTGCAGTTCATGAGAACACACAGAGGACTTACACATCTGCTGCTGATTTGTTCAATCTAGATTATGCAGCAGAAAGTGAATACCAAATGTTTCCAGGTGAGGAAATCACAATTGCTAAAGGCTACTTGAGCATAATTGAATCTTTAGCATCTGTGCTACCTCCTGGTTTGGTTCAGTTGGGTAGAAAAGTCACAAGAATTGAATGGCAGCCGGAGAGACACGAGGCGATGAATTTGGAAAATGGAAGACCATGTTCTTCTAGGCCTGTGATGCTACATTTCTGTGATGGCTCTATTATGTCTGCGGATCATGTCATTGTCACAGTTTCACTTGGAGTGTTGAAGGCTTCTATTCGTGATGATGATTCAGGTATGTTAATGTTTAATCCCCCTTTACCCTCTTTCAAGGCCGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAATAAGTTGTTTATGCAATTGAGTGAGCCTCCACATGAACATTCCAAAGGGTTCCCCTTCTTGCAAATGGTTTTTCATTCACCTCAATCTGAGTTGAGGCACAAGAAAATACCCTGGTGGATGAGGAGGACAGCTACCCTTTGTCCAATTTACAACAATTCTAGTGTCCTCCTATCTTGGTTTGCTGGGGAAGAAGCACTGGCACTTGAGTCACTCAAAGATGAAGAGATCATTGAAGGGGTTTCAGACACAATTTCATGCTTCCTATCGAATTCACTTGAGTTTTGCAACGGGAATGTGAATTCTGAGAAGTATTCTCACGAATATAAGGTGAAATTCAGTAAGGTGTTAAAGAGCAAGTGGGGAACAGATCCATTGTTTTTAGGCTCATACAGTCATGTGGCAGTTGGATCAAGTGGTGATGATTTAGATACAATGGCAGAGCCATTGCCAAAATGCCTCACTTGTGCTTCACCACCACTTCAAATCTTGTTTGCAGGGGAAGCAACTCACAGAACCCATTATTCTACAACTCATGGAGCTTACTTTAGTGGCCTTAGGGAAGCCAATAGGCTTCTTCAACACTATTCACTGTGTTAA 1593 0.4325 MVAKKPLIVIIGAGMAGLTAANKLHSVSASKDLFEVCVVEGGNRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQQIHALDSEQPWECMDGNENKATTIAEGGFVLNPSSHVDPITKLFNNLMDHAQRKMPTTTKGDCGNLSVGSFLKQGLDAYCGSSKEEEELKGFGKWSKKLLDEAIFAVHENTQRTYTSAADLFNLDYAAESEYQMFPGEEITIAKGYLSIIESLASVLPPGLVQLGRKVTRIEWQPERHEAMNLENGRPCSSRPVMLHFCDGSIMSADHVIVTVSLGVLKASIRDDDSGMLMFNPPLPSFKAEAISRLGFGVVNKLFMQLSEPPHEHSKGFPFLQMVFHSPQSELRHKKIPWWMRRTATLCPIYNNSSVLLSWFAGEEALALESLKDEEIIEGVSDTISCFLSNSLEFCNGNVNSEKYSHEYKVKFSKVLKSKWGTDPLFLGSYSHVAVGSSGDDLDTMAEPLPKCLTCASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYSLC 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00519 530 Gene3D - 8 522 IPR036188 -
Gma17g00519 530 PANTHER POLYAMINE OXIDASE 5-RELATED 1 528 - -
Gma17g00519 530 Pfam Flavin containing amine oxidoreductase 15 524 IPR002937 GO:0016491
Gma17g00519 530 PANTHER FLAVIN MONOAMINE OXIDASE 1 528 - -
Gma17g00519 530 SUPERFAMILY FAD/NAD(P)-binding domain 4 527 IPR036188 -
Gma17g00519 530 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 464 - -
Gma17g00519 530 Gene3D - 94 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00519 Gma-Chr17 4264988 4266661 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00519 K12259 - gmx:106796594 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00519 17 4264988 4266661 Gma17g00519 17 4264988 4266661 ECH
Gma17g00519 17 4264988 4266661 Gma13g00840 13 22677523 22685517 GST
Gma17g00519 17 4264988 4266661 Gma15g01583 15 15404638 15406676 PCT
Gma17g00519 17 4264988 4266661 Gma09g00572 09 6156361 6158232 PCT
Gma15g01583 15 15404638 15406676 Gma17g00519 17 4264988 4266661 PCT
Gma09g00572 09 6156361 6158232 Gma17g00519 17 4264988 4266661 PCT