Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00840 ATGAAAAATTGCATTGGACGTTTTAGTTTGATATCCGACTCTAAGATGAATATCATGTTTGATACTCTTGATAATATACAATATCTGGGGCCTCTTTGGAATGGAAGGGATGAGTTGGTCGGGAAGGACGCTCATAGTAGTCATCCTTTACCTGTCTCACCAGATCATATGGTACCTGTTAAGCGGATACATGTGGATTCGGGGACATCCGTGGTAGCAAGTTTATCGGCAACGGCAATTAGAATAGAACAAGAACTCTTGGACCACTCGGAATACTATTATGGACTATGCAAAGCTAAGTATCAAGTAGCAACAATGGTGGTGAAGAAGCCGCAAATTGTGATAATTGGAGCAGGAATGGCAGGCCTCACTGCTGCCAACAAGCTTCACAGTGTGAGTGCCTCAAAGGACTTGTTTGAGGTGTGTGTTGTTGAAGGTGGAAACAGGATTGGTGGGAGAATCAACACATCAGAGTTTGGTGGTGACCGAATTGAGATGGGTGCTACTTGGATCCATGGAATTGGAGGCAGCCCAATTCACAAAATAGCTCAACAAATCCATGCACTTGAGTCTGAGCAACATTGGGAGTGCATGGATGGGAATGAGAATAAGGCCACCACCATTGCTGAAGGTGGCTTTTTGGTAAACCCTTCCCTTGTTGACCCCATCACAAAGCTTTTCAACAATCTCATGGATCATGCTCAGGGAAAGATACCAACAACAACAACAACAACAACAAAGGGTCACTGTGGAAAACTTAGTGTTGGCTCTTTTCTCAGACAAGGCCTCGATGCTTATTGTGGTTCATCAAAAGAGGAAGAGGAGCTCAAAGGGTTTGGAAAATGGAGTAGGAAGTTACTTGATGAAGCAATCTTTGCAATGCATGAGAACACCCAGAGGACTTATACATCTGCTGCTAACTTGTTCACTCTGGATTATGCAGCAGAAAGTGAATGCCAAATGTTTCCAGGTGAAGAAATCACAATTGCTAAAGGCTACTTGAGCATAATTGAATCTTTGGCTTCTGTGCTACCACCTGGTTTGGTTCAGTTGGGAAGAAAAGTCACAAGAATTGAATGGCAGCCCGATAGACACGAGGCGATGAATTTGGAAAATGGAAGAACATGCTCTAGGCCTGTGATGCTACATTTCTGTGATGGCTCTATTATGTCTGCGGATCATGTCATTGTCACAGTTTCACTTGGAGTGTTGAAGGCTTCTATTCGTGATGATGATTCAGGTATGTTGATGTTTAATCCCCCTTTACCCTCTTTCAAGGCCGAGGCTATTTCAAGGCTTGGTTTTGGTGTTGTTAATAAGTTGTTTATACAATTGAGTGAGCCTCCACATGAGAGAAAAGACGAACATGAACACTCCAAAGGGTTCCCCTTCTTGCAAATGGTTTTTCACTCACCTCAATCTGAGTTGAGGCACAAGAAAATACCCTGGTGGATGAGGAGGACAGCTACCCTTTGTCCCATTTACAACAATTCTAGTGTCCTCCTATCTTGGTTTGCTGGGGAAGAAGCTTTGGCACTAGAGTCACTCAAAGAAGAAGAGATCATTGAAGGGATTTCAGACACAATTTCATGCTTCCTATCACATTCACTTGAGTTTTGCAACGGGAATGTGAATTCTGAGAAGTACTCTCACGAATACAAGGTGAAATTCAGTAAAGTGTTGAAGAGCCAGTGGGGAACAGATCCATTGTTTTTAGGCTCATACAGTCATGTGGCAGTTGGATCAAGTGGTGATGATTTAGATACAATGGCAGAGCCATTGCCAAAATGCCACATTTCTGCTTCACCCCCACTTCAAATCTTGTTTGCAGGGGAAGCAACCCACAGAACCCATTATTCTACAACTCATGGAGCTTACTTCAGTGGCCTTAGGGAAGCCAATAGGCTTCTTCAACACTATTCACTGTGTTAA 1932 0.4322 MKNCIGRFSLISDSKMNIMFDTLDNIQYLGPLWNGRDELVGKDAHSSHPLPVSPDHMVPVKRIHVDSGTSVVASLSATAIRIEQELLDHSEYYYGLCKAKYQVATMVVKKPQIVIIGAGMAGLTAANKLHSVSASKDLFEVCVVEGGNRIGGRINTSEFGGDRIEMGATWIHGIGGSPIHKIAQQIHALESEQHWECMDGNENKATTIAEGGFLVNPSLVDPITKLFNNLMDHAQGKIPTTTTTTTKGHCGKLSVGSFLRQGLDAYCGSSKEEEELKGFGKWSRKLLDEAIFAMHENTQRTYTSAANLFTLDYAAESECQMFPGEEITIAKGYLSIIESLASVLPPGLVQLGRKVTRIEWQPDRHEAMNLENGRTCSRPVMLHFCDGSIMSADHVIVTVSLGVLKASIRDDDSGMLMFNPPLPSFKAEAISRLGFGVVNKLFIQLSEPPHERKDEHEHSKGFPFLQMVFHSPQSELRHKKIPWWMRRTATLCPIYNNSSVLLSWFAGEEALALESLKEEEIIEGISDTISCFLSHSLEFCNGNVNSEKYSHEYKVKFSKVLKSQWGTDPLFLGSYSHVAVGSSGDDLDTMAEPLPKCHISASPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLQHYSLC 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00840 643 SUPERFAMILY FAD/NAD(P)-binding domain 108 640 IPR036188 -
Gma13g00840 643 Pfam Flavin containing amine oxidoreductase 120 637 IPR002937 GO:0016491
Gma13g00840 643 PANTHER POLYAMINE OXIDASE 5-RELATED 106 641 - -
Gma13g00840 643 SUPERFAMILY FAD-linked reductases, C-terminal domain 434 577 - -
Gma13g00840 643 Gene3D - 199 583 - -
Gma13g00840 643 Gene3D - 113 635 IPR036188 -
Gma13g00840 643 PANTHER FLAVIN MONOAMINE OXIDASE 106 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00840 Gma-Chr13 22677523 22685517 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00840 K12259 - gmx:100809633 1078.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g00840 13 22677523 22685517 Gma13g00840 13 22677523 22685517 ECH
Gma17g00519 17 4264988 4266661 Gma13g00840 13 22677523 22685517 GST
Gma13g00840 13 22677523 22685517 Gma15g01583 15 15404638 15406676 PCT
Gma13g00840 13 22677523 22685517 Gma09g00572 09 6156361 6158232 PCT
Gma15g01583 15 15404638 15406676 Gma13g00840 13 22677523 22685517 PCT
Gma09g00572 09 6156361 6158232 Gma13g00840 13 22677523 22685517 PCT