Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma17g00508 ATGAGCAACGACAAGGACACATTCAACGTCGCCGATCTCACTTCTGCTCTCAACGAGGACAATAGAGCAGACCTTGTCAATGCTCTTAAGAGCAAGATACAGAGTTTGGCTGGACAACACTCGGATATTCTAGAGTCTCTGTCGCCCAATGTCCGAAAGCGTGTTGAGGTTCTTAGAGAGATCCAGGGCCAACATGATGAATTAGAGGCTAAATTTTTTGAAGAGAGAGCAGCTCTCGAGGCCAAATACCAAAAATTGTATCAACCACTTTACACAAAGCGGTACGAAATAGTAAATGGTACTACGGAAGTTGAAGAAGGGGCAGTGAAAGAAACAGCACCTGATAATGAAGAGGATCAAGAATTTGCTCGTGTAGAGAAAGGAGTGCCTGCATTTTGGCTTACTGCTATGAAAAACAATGAAGTGTTGGCTGAGGAGATTTCAGAGCGTGACGAAGGTGCTCTTAAGTATCTCAAAGATATCAAGTGGAGCAGGATAGAAAACCCTAAAGGATTCAAGCTTGACTTTTTCTTTGATACCAACCCTTATTTTACCAATTCTGTCTTGACAAAAACATATCATATGATTGATGAGGATGAACCAATATTGGAGAAAGCAATTGGGACTGAAATTCAATGGCACCCAGGAAAATGTCTGACACAGAAGATTCTTAAGAAAAAACCTAAGAAGGGTTCGAAGAATGCTAAACCAATTACCAAAACTGAAAATTGTGAAAGCTTCTTCAATTTCTTCAACCCCCCGCAAGTTCCTGAAGATGATGAAGACATTGATGAAGATGTGGCTGAGGAACTTCAGAATCAGATGGAACAAGACTATGACATAGGGTCCACAATAAGAGACAAGATTATTCCCCATGCTGTATCATGGTTTACTGGGGAGGCCattcagggggacgagtttggagatctggaggacgatgaggatgatgaagatattgaagaggacgatgatgaagatgaagaggacgatgacgatgatgatgatgacgatgatgatgaggaagagagcaagaccaaaaagaagTCATCAGCACCTAAGAAGAGTGGAAGAGCACAACTTGGTGATGGCCAGCAGGGTGAGCGACCTCCAGAGTGCAAGCAGCAGTAG 1128 0.3723 MSNDKDTFNVADLTSALNEDNRADLVNALKSKIQSLAGQHSDILESLSPNVRKRVEVLREIQGQHDELEAKFFEERAALEAKYQKLYQPLYTKRYEIVNGTTEVEEGAVKETAPDNEEDQEFARVEKGVPAFWLTAMKNNEVLAEEISERDEGALKYLKDIKWSRIENPKGFKLDFFFDTNPYFTNSVLTKTYHMIDEDEPILEKAIGTEIQWHPGKCLTQKILKKKPKKGSKNAKPITKTENCESFFNFFNPPQVPEDDEDIDEDVAEELQNQMEQDYDIGSTIRDKIIPHAVSWFTGEAIQGDEFGDLEDDEDDEDIEEDDDEDEEDDDDDDDDDDDEEESKTKKKSSAPKKSGRAQLGDGQQGERPPECKQQ 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma17g00508 375 Gene3D - 45 104 - -
Gma17g00508 375 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 1 375 IPR002164 GO:0005634|GO:0006334
Gma17g00508 375 SUPERFAMILY NAP-like 30 299 IPR037231 -
Gma17g00508 375 MobiDBLite consensus disorder prediction 300 375 - -
Gma17g00508 375 MobiDBLite consensus disorder prediction 305 340 - -
Gma17g00508 375 PANTHER NUCLEOSOME ASSEMBLY PROTEIN 1,2 1 375 - -
Gma17g00508 375 Gene3D Nucleosome assembly protein 124 300 - -
Gma17g00508 375 Pfam Nucleosome assembly protein (NAP) 53 300 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma17g00508 Gma-Chr17 4180130 4182882 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma17g00508 K11279 - gmx:100818687 598.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00508 17 4180130 4182882 Gma17g00508 17 4180130 4182882 ECH
Gma17g00508 17 4180130 4182882 Gma13g00855 13 22802553 22805771 GST
Gma17g00508 17 4180130 4182882 Gma15g01597 15 15694760 15697791 PCT
Gma17g00508 17 4180130 4182882 Gma09g00584 09 6385048 6388644 PCT
Gma15g01597 15 15694760 15697791 Gma17g00508 17 4180130 4182882 PCT
Gma09g00584 09 6385048 6388644 Gma17g00508 17 4180130 4182882 PCT